| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4463 |
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| Symbol | |
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| ID | 8228066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5385935 |
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| End bp | 5387431 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932309 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003088829 |
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| Protein GI | 255038208 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.689594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.530069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCCAC AGGAGAGTTT GACTTCCGGG CAGGATACAG TTGAGAGTAT TGCTCAGGAA
GAAGGTGATT TGATGCCGTC ACTTCCGGAG GTTGAGGAGA TCGGACCGAA CCCCGCGGTT
CCGGAGCAGC TTTTGAAAGA ACGCTTCGCA AAGCTCGAAA AGTCGATCCC GCTCACTTAC
CACAAATCGT CCCATGAATT CGTAGAGTAT TTTATCTACA AAAAAGCGCA TTTCACACGG
ACGATGATGG AGCGTATGCC GCTCTACTTC CCGCTTTTTG AAAAAGCATT GGCCAAACAC
GGCCTGCCTA CCGAACTGAA ATACCTTTCG ATGATCGAGT CGGGATTGAA CCCGACTGTG
ATTTCCCATG CCCGTGCAGG AGGTCTCTGG CAGTTTATGC CGGCTACCGG ACGGGAATTC
GGTCTTTATC AGGATAAATA CATCGACGAG CGTTTCGAAC CGACCAAAGC TACCGAAGCG
GCTTGTTTGT ATCTGAAACA GCTTTACAAG ATCTTCGGCG ACTGGGAGCT TGCATTGGCT
TCGTATAATA CCGGCCCGGG CAATGTGAAA CGCGCCATGC GCCGCTCGCG CGGGACGACC
TTCTGGACGA TCTACAACGT CCTTCCCCGC GAAACCCGTT CCTACGTGCC GCAATATGTG
GCTATGAACT ACATGATGAA CTACGGCTAC GACCACGGCA TTTTCCCCGA AAACACAGAA
TTCCAGATCC CGAACGATAC CATTCACATC AATGGCTACA TTGATCTCGC CACATTCTGC
GACAATGCAA GCATTGATTT TGAAATCCTT AAAAAACTGA ATCCGCAAAT CACCAAAAAA
GTCCTCCCGG ACCAGACGCG TGATTTTGTG CTCAAAGTGC CGAGCGTACG CTTTACCTAC
CTGATGAGCA ACCGCGCCTC GATCATGGAC TCCTGCACCA GAAGGCTTCT GTCTAATGGC
GTAATGGTAG CCAAGGCCGA CAGCACGAAA ACTGACTCGA TCGGAGGCAA CGGCGCATTC
CCTTACGTAC TCGCTTCCAA TGTCCAGAAT GTGTCGGACG ACGAATCCTA TGACGAAGAA
GGCGAAGAAG AGGTAGTTCA GCGCAGCCGC ACCAAACGCG TGTCATATAC CGTGCGCCGT
GGCGACAATG TGGCGAGCAT TGCCCGGAAA TACGGGGTTT CGGTGGCATC ACTGAGAAAA
TGGAACCACA TCCGCCGCAA CATGATCCGC CGCGGACAAC GGCTCGTCAT TTACAAGGAA
GTGCGCGAAA CTGCACCAGC AGCCCGCATT GCGGCGAAGC CCCGGCCACA GCAGAAAGAA
GAGCAGGTGG CCAACCAGCA GCGTCATACC CGGAAACGTT ATCATACCGT ACAAAAAGGA
GATACATTAT GGATTATTTC GCAGCGCTAC GGTCTGGAAA TCGGTCAGCT AAAGAAACGG
AACAAAATCA GGGGCAACTC GATCAAGCCG GGCCAGAAAT TGATTATTTC TACCTAG
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| Protein sequence | MVPQESLTSG QDTVESIAQE EGDLMPSLPE VEEIGPNPAV PEQLLKERFA KLEKSIPLTY
HKSSHEFVEY FIYKKAHFTR TMMERMPLYF PLFEKALAKH GLPTELKYLS MIESGLNPTV
ISHARAGGLW QFMPATGREF GLYQDKYIDE RFEPTKATEA ACLYLKQLYK IFGDWELALA
SYNTGPGNVK RAMRRSRGTT FWTIYNVLPR ETRSYVPQYV AMNYMMNYGY DHGIFPENTE
FQIPNDTIHI NGYIDLATFC DNASIDFEIL KKLNPQITKK VLPDQTRDFV LKVPSVRFTY
LMSNRASIMD SCTRRLLSNG VMVAKADSTK TDSIGGNGAF PYVLASNVQN VSDDESYDEE
GEEEVVQRSR TKRVSYTVRR GDNVASIARK YGVSVASLRK WNHIRRNMIR RGQRLVIYKE
VRETAPAARI AAKPRPQQKE EQVANQQRHT RKRYHTVQKG DTLWIISQRY GLEIGQLKKR
NKIRGNSIKP GQKLIIST
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