| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4462 |
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| Symbol | gatA |
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| ID | 8228065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5384144 |
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| End bp | 5385589 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932308 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_003088828 |
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| Protein GI | 255038207 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.956052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.365252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAAGAGT ATCTGACGCT GACCGAAATT CAGAGAGATC TACGTGAAGA AGGTTTGACG
TGCGTCAAGT TGGTTGACCA CTATTTGGAA AAAATAGAGG CTAACAAGCA TCTCAATGCT
TTCGTTGAAG TTTATACAGA GGAAGCAAAA AAGGCCGCTC TGGCCGTGGA TGCGAAGATC
GCCAACGGCA CCGCCGGAAA GCTGGCAGGC ATGGTGATCG GTCTTAAAGA TGTGCTTTCG
CTCACTGGCC ACGGCTTGCA GGCCGGAAGC CAGATCCTTC AAAATTATAC GGCACCTTAC
ACCGCAACGG CCGTGCAGCG GCTGCTAGAT GAAGACGCGA TCATCATCGG GCGGCAAAAT
TGCGACGAGT TTGCGATGGG TTCCTCGAAT GAAAATTCTT CGTTCGGACC GGTGCTCAAT
GCCATTAACA ACGCAAAAGT GCCCGGCGGC TCGTCGGGTG GATCGGCGGT GGCCGTGCAG
GCGGGGCTTT GCCATGCATC GCTGGGGAGC GACACTGGAG GTTCGGTGCG CCAGCCGGCG
GCATTCTGCG GGGTGATCGG CGTGAAGCCG TCTTACGGAC GCATTTCGCG CTACGGCCTC
ATTGCCTACG CTTCGTCATT TGACTGCATC GGTCCCATTA CCAAAAGCGT GGCCGACGCT
GCGTTGCTTC TGGAAGTAAT GTCGGGTGCC GATGATTTCG ATAGTACCGT TTCGGAACGT
CCGGTGCCGG CTTACACAGC CGGTCTGGAA TGGAAAGGCA AAGCAAAAAT CGGGTACATC
CGCAGCGCGG TGGAAAACGA GGCCATAGCG CCGGAAATCC GCCGGCAAAC TTCCGAAGTG
CTCGATCGCC TGCGTGCGGA AGGGCATGAG GTGACGGCCA TTGATATGCC GCTGCTGGAT
TCGCTCCTGC CCACCTATTA TATCCTTACT ACTGCCGAGG CAAGTTCCAA TCTCTCGCGT
TTCGACGGCG TGCGGTACGG CTACCGCAGT CCCGAATCCG TAGATCTTGA AAGTATGTAC
AAAAAGACAC GTACAGAAGG TTTTGGAGAT GAAGTAAGGA GAAGAATACT ATTGGGTACT
TTCGTGTTAA GCGCAAATTA TTACGACGCA TACTATACCA AGGCGCAACG CGTTAGAAGA
TTGGTGCGGG AAGAAACGAA CCGGTTTTTC GAGCAGTTCG ATTTTCTGAT TTCCCCGGTT
ACACCTACCA CAGCCTTTAC CCTTGGAGAA AAAACCGAAG ATCCATTGCA AATGTATCTG
GCGGATATTT TCACAGTGCA AGCGAATGTC GTGGGCAATC CTGCGGTGTC CATCCCGAAT
GGGCTGGACG ATCAGGGAAT GCCGATCGGG ATTCAAATCA TGGCGCCTTA TTTCGGTGAG
GAAAAGATGC TGGCGTTTGC CAATTATCTT ACAGCGTTGA ATCAGGAAGC CGTAGCATAC
AACTAA
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| Protein sequence | MKEYLTLTEI QRDLREEGLT CVKLVDHYLE KIEANKHLNA FVEVYTEEAK KAALAVDAKI
ANGTAGKLAG MVIGLKDVLS LTGHGLQAGS QILQNYTAPY TATAVQRLLD EDAIIIGRQN
CDEFAMGSSN ENSSFGPVLN AINNAKVPGG SSGGSAVAVQ AGLCHASLGS DTGGSVRQPA
AFCGVIGVKP SYGRISRYGL IAYASSFDCI GPITKSVADA ALLLEVMSGA DDFDSTVSER
PVPAYTAGLE WKGKAKIGYI RSAVENEAIA PEIRRQTSEV LDRLRAEGHE VTAIDMPLLD
SLLPTYYILT TAEASSNLSR FDGVRYGYRS PESVDLESMY KKTRTEGFGD EVRRRILLGT
FVLSANYYDA YYTKAQRVRR LVREETNRFF EQFDFLISPV TPTTAFTLGE KTEDPLQMYL
ADIFTVQANV VGNPAVSIPN GLDDQGMPIG IQIMAPYFGE EKMLAFANYL TALNQEAVAY
N
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