| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4453 |
|---|
| Symbol | |
|---|
| ID | 8228056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5370510 |
|---|
| End bp | 5372180 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644932299 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003088819 |
|---|
| Protein GI | 255038198 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5368] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000395035 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.300253 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTTA AACACCTTCT TATTTTTTGT ACGCTTATCT GGCTCGGGGT TTCCTGTAAA
TCGGAAAAGG AAGCCCCCGG GCCATCCACT CCCGGAATAC CGTCGTCGTT CGGTTTCAAT
TCACTGGAAG TGAACGGCGC GTATTCGGGG TTCAAATACA ATGATGTAAA CCTGAAACCT
AAAATCAGGT TTACATTTTC CGCTCCCCTT AATAATGCGA CCATTGCGAA CGGCATCGTG
TTCCGCAGCG CTGCGGGCGA GGCCGTTGCG TTCTCCTCCA CCCTTGAAAA GAGTGACAGT
GCGGTGGTGA TTACGCCTTC TGCCGATCTG GATTACCTGA CCAGCTATTC GGTCACAGCC
TCCAAAGCAT TGAAATCTAA AGCCGGCGGA ATGCTCCTGA GTGAAGCGAA AGTGGAACTC
GTTACTACGC TGGACTCTGC GGACAAATTC CCGGTGATCA GCGACGAAGC ATTGCTGACA
TTGGTCCAAC GACAAACATT CAAATACTTT TGGGATTTCG CGCACCCGGT GAGCGGGCTC
GCCCGCGAGC GCAACACTTC CGGCGACGTG GTAACCTCCG GCGGCAGCGG TTTTGGTATC
ATGACCATCC CCATTGCCAT CGAACGTAAG TTCATCACCC ATGCGCAGGG TTTGGAGCGG
ATGCAAAAGA TCGTGGGTTT CCTCAAAAAC GCGCAGACGT TTCACGGCGC ATTCCCGCAT
TGGCTCAATG GCGCTACCGG CGTCGCGGTG CCGTTCAGCG AGAAGGACAA TGGCGCTGAT
TTGGTAGAAA CCTCTTTCCT CGTGCAGGGA TTGCTCATGG TCCGCCAGTA TTTCAATGCC
AACACCGCCG CTGAAACCGC TTTAAGGGCA GATATCAATG CGATTTGGGA AGCGGTGGAA
TGGGACTGGT TCAGGAAAAG CAATGAAAAT GTGCTCTACT GGCATTGGAG CCCTAATTTC
GGCTGGGACA TGAACCACCA GATCCGCGGC TGGAACGAAT GCCTGATTAC CTACGCATTG
GCAGCCTCCT CTCCTAAGCA CGCGATCGAC AAGACGGTGT ATGACAATGG CTGGGCCGGC
AACGGCACAT TTGCGAACGG CAAAGACTAT TATGGCATCA CATTACCACT GGGCGAGCCG
CTGGGTGGGC CGCTGTTCTT CTCGCATTAT TCGTTTTTAG GATTGAACCC AACGGGACTT
ACCGACCGTT TTGCCAATTA TTTTACCCAA AACAAAGCGC ATACCCTCGT CAACTATAAC
TACTGCAAGG CCAATCCGCA GCAACATTAC GGTTACAGCG ATCAATGCTG GGGCCTTACC
GCAAGCGACA TCCCGAACGG CTACAATGCC AACTCGCCGT CCAACGACCG GGGGGTGATC
ACGCCTACGG CCGCATTATC GGCGTTCCCG TATACGCCTG CGGAATCGAT GAAAGCTTTG
AAATTCTTCT ATTACAAACT TGGCGACAAG CTGTGGGGCG AGTACGGTTT TCACGACGCG
TTCTCGCTGG ACCAGCTGTG GTTCGCGGAT TCCTACCTCG CCATTGATCA GGGACCAATC
GTGGTCATGA TCGAAAACCA CCGCACCGGC CTGCCCTGGA AGCTCTTCAT GAGCAGTCCG
GAGGTGAAGA CCGGTCTCAA AAAGCTCGGG TTCAGTAGCC CTGCGCTTTA A
|
|---|
| Protein sequence | MPFKHLLIFC TLIWLGVSCK SEKEAPGPST PGIPSSFGFN SLEVNGAYSG FKYNDVNLKP
KIRFTFSAPL NNATIANGIV FRSAAGEAVA FSSTLEKSDS AVVITPSADL DYLTSYSVTA
SKALKSKAGG MLLSEAKVEL VTTLDSADKF PVISDEALLT LVQRQTFKYF WDFAHPVSGL
ARERNTSGDV VTSGGSGFGI MTIPIAIERK FITHAQGLER MQKIVGFLKN AQTFHGAFPH
WLNGATGVAV PFSEKDNGAD LVETSFLVQG LLMVRQYFNA NTAAETALRA DINAIWEAVE
WDWFRKSNEN VLYWHWSPNF GWDMNHQIRG WNECLITYAL AASSPKHAID KTVYDNGWAG
NGTFANGKDY YGITLPLGEP LGGPLFFSHY SFLGLNPTGL TDRFANYFTQ NKAHTLVNYN
YCKANPQQHY GYSDQCWGLT ASDIPNGYNA NSPSNDRGVI TPTAALSAFP YTPAESMKAL
KFFYYKLGDK LWGEYGFHDA FSLDQLWFAD SYLAIDQGPI VVMIENHRTG LPWKLFMSSP
EVKTGLKKLG FSSPAL
|
|---|
| |