Gene Dfer_4452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4452 
Symbol 
ID8228055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5369102 
End bp5370481 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content55% 
IMG OID644932298 
Producthypothetical protein 
Protein accessionYP_003088818 
Protein GI255038197 
COG category[S] Function unknown 
COG ID[COG5368] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000124037 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.847922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAT ACTTCCAACT ACTGCTATGC CTCGCGCTGT TTGCCGGCAC CCAGGTTGAC 
TGCCGGGCGC AAAAGAAAAA ACAGGCAGCT GCAAAACCGG CGGCATTCAA TCCGGCCGAC
CGGCCTAAGA ACCTCTCCGA CACCGCATTG CTCGAACTGG TTCAGAAACA GACATTCCGT
TACTTCTGGG ACTTCGGTCA CCCCGTAAGC GGCCTCGCCC GCGAGCGAAG CAATATCGCA
TTCGATTACG GCGACGAAGT GTGCACGATC GGCGGCACCG GTTTTGGTGT GATGGCAATG
GTGGTGGCCG CGGAAAGAAA GTGGCAGCCC CGCGATTCTG TTGCCGCGAG GTTATTGAAA
ATGGTTAAAT TCCTCTCGAA AGCCGACCAT TACCACGGGA TTTTCCCCCA CTGGCTCAAT
GGCGCCACAG GCAAGATCGT TCCGTTCGGG CGAAAAGATG ATGGCGGCGA CCTCGTGGAA
TCGTCGTTCC TGTTCCAGGG ACTTCTGGCG GTAAGACAGT ATTTCGACCG CGACACTGCA
CTTGAACGCG AGCTGCGCAG CCGCATTACG TGGATATGGA ACGAGGCGGA ATGGGACTGG
TACACCCGCG GCAATCCGAA CCAGCTTTAC TGGCATTGGA GCCCCAACCA TGGCTGGGCG
ATGAACTTCG AGCTGCGCGG CTATAATGAA ACGCTCATTA CCTACATCAT GGGAGCCGCC
TCGCCGCGCT ACCCGATTAC CCGCCAGGTG TACGACAAAT GCTGGGCGCA AAGCGACCAT
TTCCGCAACG GAAGGGAGTT TTATGGTGTA AAACTGCCGC TCGGTTTCGA CGGCGGCGGA
CCGCTGTTTT TCGCGCACTA TTCGTACCTT GGCCTCGATC CGCGCAACCT GAAAGATCAG
TATGCCGATT ACTGGGAGCA AAATGTGAAC CATTCGCTGA TTAACTACAA GCATTGCGTA
GCCAACCCGG GCAAGTTCAA AGGCTATGGT GAAAACAGCT GGGGGCTTAC GGCCAGCGAT
ACTTACAATG GCTACAATGC GCATTCCCCT ACAAACGATT TCGGGACGAT CACCCCTACT
GCGGCATTGT CGTCGTTCCC CTACACGCCG GAGCAGTCGA TGAAGGCATT ACGCCATTTT
TATGATGATT TGGGCGATAA GATCTGGTCG GAATACGGCT TTACCGATGC ATTCAACGAA
TCGCAGAACT GGTATGCCAC ATCGCACCTG GCGATCGACC AGGGACCGAT TATCGTGATG
ATCGAAAACT ACCGGTCGGG CTTGCTTTGG AAGCTGTTTA TGAAAGATCC TGAGGTGCAG
GCCGGTTTGA AAAAGCTCGG TTTCGAAAGC CCGGCACTGG GCGCATCCAG CAAAAATTAA
 
Protein sequence
MKLYFQLLLC LALFAGTQVD CRAQKKKQAA AKPAAFNPAD RPKNLSDTAL LELVQKQTFR 
YFWDFGHPVS GLARERSNIA FDYGDEVCTI GGTGFGVMAM VVAAERKWQP RDSVAARLLK
MVKFLSKADH YHGIFPHWLN GATGKIVPFG RKDDGGDLVE SSFLFQGLLA VRQYFDRDTA
LERELRSRIT WIWNEAEWDW YTRGNPNQLY WHWSPNHGWA MNFELRGYNE TLITYIMGAA
SPRYPITRQV YDKCWAQSDH FRNGREFYGV KLPLGFDGGG PLFFAHYSYL GLDPRNLKDQ
YADYWEQNVN HSLINYKHCV ANPGKFKGYG ENSWGLTASD TYNGYNAHSP TNDFGTITPT
AALSSFPYTP EQSMKALRHF YDDLGDKIWS EYGFTDAFNE SQNWYATSHL AIDQGPIIVM
IENYRSGLLW KLFMKDPEVQ AGLKKLGFES PALGASSKN