Gene Dfer_4450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4450 
Symbol 
ID8228053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5366317 
End bp5367960 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content50% 
IMG OID644932296 
ProductPeptidase M1 membrane alanine aminopeptidase 
Protein accessionYP_003088816 
Protein GI255038195 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.443873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.856561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGAA TACTCGCCGG CATCAGTTTA CTGCTCTTTT CATTCAATGC ATTCGCTCAG 
AAGGGCGAAT TTACACATGC CGACACCCTG CGCGGGTCGA TCACACCCGA ACGCTCCTGG
TGGGACCTTA CTTACTACCA CCTCAGTGTG CGGCCCAACG AAAAAGACAG CACGCTCACC
GGCAGTACCG TTATCCGATA CAAGGTTTTG AAGCCCTATC AGACCATGCA GGTGGATTTG
CAGGAACCTC TGAACATTAC CCGGGTGGTT CAGGACGGCG AAACGCTGAC TTATCGCCGG
GATGGTAATG CATTTTTCAT TACGTTAAAG AAAACCCAGG AAACCGGCAA GGCAGAGTCG
GTTGAAGTAT TTTACACCGG AAAGCCACGC CTTGCCAAGC GTCCGCCGTG GGATGGCGGC
GTGCAATGGG TACCTGATGG AAAAGGCAAT ACCATCATTT CAACCTCATG CCAGGGACTG
GGTGCCAGCG TGTGGTGGCC CTGCAAGGAC CATATGTACG ACGAACCCGA CAGCATGCTC
ATCAGCATCA CCGTGCCGAA GAATCTCATG GACGTTTCGA ACGGCAACCT GCGGTCGGTG
GTGGAAAACA GCGACAATTC GCATACTTTC AACTGGTATG TGGACAACCC GATCAACAAT
TACGGGGTGA ACATGAATGT AGCCAACTAT GTAAGCTGGA AAGAGACATT CAAGGGCGAA
AAAGGCGATT TGCAACTGAG CTATTACGTA CTTCCGCAGA ACCTCGAAAA GGCGAAAGAG
CAGTTCAAAC AGGCTCCGAG GATGCTCAAA GCGTTCGAAC ACTGGTTTGG GCCTTATCCA
TTTTACGAAG ACGGTTACAA GCTTGTGGAA GTACCTTACC TCGGCATGGA GCATCAAAGC
TCGGTGACCT ATGGTAACGA ATACAAAATG GGTTATCGCG GCAAAGACTT GTCGAACACG
GGCTGGGGAC TGAAATGGGA CTTCATTATC ATCCACGAAA GCGGTCATGA GTGGTTTGCC
AACAACATCA CCTACAAGGA TGTGGCCGAT ATGTGGGTGC ACGAAAGCTT TACCAACTAC
TCCGAAAACC TATACACGGA ATTTTACTTT GGAAAAAAAG CCGGCGAAGA TTATGTGATC
GGCACGAGGG GGCTCATCGC CAACGACATT CCCATTGTGG GAATTTACGG CGTGAACAAG
GAAGGATCGA AGGATATGTA TTACAAAGGC GGCAATATGC TGCACACGAT CCGGCAAGTA
GTGAACGACG ATGAGAAATG GCGCCAGATC CTCCGTGGCC TGAATAAGAC GTTTTATCAT
CAAACCGTGT ACGGCTCCCA GATTGAGCAG TACGTAAGCG AGCACGCAGG AAGGGATCTT
TCGAAAGTCT TCGATCAATA TCTCCGTGAT GTGCGGATAC CGGTTCTGGA ATATGCATTC
GGCAGTAAAG GCCTGCAATA CCGCTGGACT AATGTGGTAA ATGGCTTTGA TATGCCTGTG
AAGGTGAAAC TCGCCAGCGG CGAAGAGGAG ATGCTTAACC CGACAACCGA CTGGAAAACC
CTGAAAGTAA AAGGTGACAA AGCCTTAACG ATCGACCGGA ATTTTTATGT AGAAGCGAAG
GAATCGAAGC AGGCTTCGTT ATAA
 
Protein sequence
MLRILAGISL LLFSFNAFAQ KGEFTHADTL RGSITPERSW WDLTYYHLSV RPNEKDSTLT 
GSTVIRYKVL KPYQTMQVDL QEPLNITRVV QDGETLTYRR DGNAFFITLK KTQETGKAES
VEVFYTGKPR LAKRPPWDGG VQWVPDGKGN TIISTSCQGL GASVWWPCKD HMYDEPDSML
ISITVPKNLM DVSNGNLRSV VENSDNSHTF NWYVDNPINN YGVNMNVANY VSWKETFKGE
KGDLQLSYYV LPQNLEKAKE QFKQAPRMLK AFEHWFGPYP FYEDGYKLVE VPYLGMEHQS
SVTYGNEYKM GYRGKDLSNT GWGLKWDFII IHESGHEWFA NNITYKDVAD MWVHESFTNY
SENLYTEFYF GKKAGEDYVI GTRGLIANDI PIVGIYGVNK EGSKDMYYKG GNMLHTIRQV
VNDDEKWRQI LRGLNKTFYH QTVYGSQIEQ YVSEHAGRDL SKVFDQYLRD VRIPVLEYAF
GSKGLQYRWT NVVNGFDMPV KVKLASGEEE MLNPTTDWKT LKVKGDKALT IDRNFYVEAK
ESKQASL