| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4449 |
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| Symbol | |
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| ID | 8228052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5365657 |
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| End bp | 5366322 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932295 |
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| Product | thiamine pyrophosphokinase |
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| Protein accession | YP_003088815 |
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| Protein GI | 255038194 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1564] Thiamine pyrophosphokinase |
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| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.359554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATCAC ACCACATCGT TCGGGAGAAG CAGGAGCCTG CTTTGATTAT TGCTAATGGG
GAAGCCTGCT CTCCGGAATT GTTGGGTCAG CTGCTGGAAT GGAGCCCGTT TATTGTCGTG
CTCGACCATG CTATTTACCG GGTCCTGGAT CTGGGGATCA AAATTGATGT CTGGATGGGC
GATTTCGATC AGCCGCACGA CGTCGAAGCG ATCCGCGAGC GGCAGCATCC ACTGGAAATC
ATCAATACGC CCGACCAGGA GAAAACGGAC TTAAACAAAG CCATCGAATT CCTGATCGAG
AGAGGTTTTC CGGCCGCCAA TATCGTTTGG GCTACGGGCC GTCGTGCGGA TCATGCGATC
ACGAATATCA CGGATCTGGT GCGTTACAAG GAGAAAATCA AACTGGTGTT GCTGGACGAT
TATTCCAAAA TTTTTCCGCT CACAGGCACC TTTGAAAAAT GGTACACCGC CGGCACGCCC
ATTTCGCTCA TACCAATCGG GACGGTGGAT GGCATTGAAA CGAGTGGATT AAAATACAAC
CTTCACAAAG AAACCCTGAC GATGGGGCAT CGGACCGGCA GTAGTAATGA GGCCGAAACC
GATGGCATGG TCAGGGTGTC CGCGCAGAAT GGCGATCTGC TGATTATGGA GTGCTGGGAT
TTATAA
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| Protein sequence | MSSHHIVREK QEPALIIANG EACSPELLGQ LLEWSPFIVV LDHAIYRVLD LGIKIDVWMG
DFDQPHDVEA IRERQHPLEI INTPDQEKTD LNKAIEFLIE RGFPAANIVW ATGRRADHAI
TNITDLVRYK EKIKLVLLDD YSKIFPLTGT FEKWYTAGTP ISLIPIGTVD GIETSGLKYN
LHKETLTMGH RTGSSNEAET DGMVRVSAQN GDLLIMECWD L
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