Gene Dfer_4446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4446 
Symbol 
ID8228049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5363804 
End bp5364286 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content53% 
IMG OID644932292 
Productthioesterase superfamily protein 
Protein accessionYP_003088812 
Protein GI255038191 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAC ACGCACCAAC TAACCCGCAA ATGGAAAACA TGCGGCTCTC TTTTCTTCGC 
CAATTCATCG GTCGGCCGAT GGACCGGCAT TTCTCGCCGG TGGCCAAATG GCTGAATGGC
ATCCTCGTCG CAATTGGAGA AGGTGAAATG GAAGTGGAAT ATGTTGTGCG GGAGGATATG
TGTAATCCGA TGGGCACATT GCATGGCGGT ATTGCCGCTA CTATTCTCGA TGATATCGTC
GGAACGATGG TTTACGCAAT GGGCGGTGAG TTTGGCTTCA TATCCGTGAA CCTGAACTGC
GATTTCCTGA ATCCGGCGGT AGTGGGCGAC GTGCTCACGG CCAGATCGGC GGTGATCCGT
GCCGGAAAGA ACATTGTTCA TGTAGAAGGC AGGCTGGTGA ATGCCCAGGG GCGGATCGTT
GCGAAATGTA CAAGCAACCT CATCCGGACA GCCTTTAAAT TACCGCTCGT GCCGGGGCAG
TAA
 
Protein sequence
MDTHAPTNPQ MENMRLSFLR QFIGRPMDRH FSPVAKWLNG ILVAIGEGEM EVEYVVREDM 
CNPMGTLHGG IAATILDDIV GTMVYAMGGE FGFISVNLNC DFLNPAVVGD VLTARSAVIR
AGKNIVHVEG RLVNAQGRIV AKCTSNLIRT AFKLPLVPGQ