| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4436 |
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| Symbol | |
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| ID | 8228039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5353890 |
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| End bp | 5354897 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932282 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_003088802 |
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| Protein GI | 255038181 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.907069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCTGGC GTGAAACCAA AGATCCATAT AAAATTTGGT TATCGGAAGT GATCCTCCAA
CAGACCCGCG TGGCGCAGGG GCTGCCTTAT TACGAGCGTT TTACAGAGCA ATATCCGACC
GTATTCGACC TGGCGGCGGC CGATGAGCGC GATGTGCTCC GGCTATGGCA GGGTTTGGGG
TACTATTCCC GCGCACGGAA CATGCATTTC ACTGCCCGTC AGGTGGTCGA AGATTACAAC
GGCCGGTTTC CTGAAAGTGC GGAAAAGCTT TTGAAACTGA AAGGGCTCGG GCAATACACC
GCGGCGGCCA TAGCATCGTT TGCATTCAAT GAGGCGGTGC CGGCGATTGA CGGCAATGTG
TACCGCGTGA TGGCTCGCAT TTTCGGGATA CAGGCCGACA TGCTTAGCAA TGAGGGAAAG
AAGGAGTTTG CGGCCCTGGC AAGGCAGCTG GTGCCGAAGG ACGATCCCGC GACCTACAAC
CAGGCGATGA TCGAGTTCGG TGCATTACAA TGTGTACCGG CGTCGCCGAA CTGCGCGGCT
TGTATTTTCA ATGACCGCTG TTTCGCCTAT GAACACGGCA TGCAGGGGCA GTTGCCGGTG
AAGATCAAAA AGTTGACCAT TAAGCACCGT TTTCTGAACT ATTTCATCAT TAGGCAAGGA
AACAGACTCG CCATGCATGA GCGTCTTGCC CGCGATATCT GGTCTGGCTT ATACGATTTT
TACCTGATTG AAACCCGGAC ACCGGCTACC ACACTTGATC ACCTGACCAT CCCTGAACCC
ATCTTCCAGA ACCTGCTTTC AAAAGGAACA ATACAGGAGG TCCCGAAAGT ATATTCCCAC
ATCCTGACCC ACCAGCGCTT GCAGGTACGA TTCTGGTGGC TGGAAATTCC GGAAACCGAA
CGGATAGATT TGCCCCCCGG ATTGGCTTTT TACGATGATA AGGAAGTGGA AGTGCTGCCA
AAACCTATTC TGATTGATAC GGTTTTGCGC GAGGAAAACT ATCTCTAA
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| Protein sequence | MPWRETKDPY KIWLSEVILQ QTRVAQGLPY YERFTEQYPT VFDLAAADER DVLRLWQGLG
YYSRARNMHF TARQVVEDYN GRFPESAEKL LKLKGLGQYT AAAIASFAFN EAVPAIDGNV
YRVMARIFGI QADMLSNEGK KEFAALARQL VPKDDPATYN QAMIEFGALQ CVPASPNCAA
CIFNDRCFAY EHGMQGQLPV KIKKLTIKHR FLNYFIIRQG NRLAMHERLA RDIWSGLYDF
YLIETRTPAT TLDHLTIPEP IFQNLLSKGT IQEVPKVYSH ILTHQRLQVR FWWLEIPETE
RIDLPPGLAF YDDKEVEVLP KPILIDTVLR EENYL
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