Gene Dfer_4431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4431 
Symbol 
ID8228034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5348620 
End bp5349705 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content50% 
IMG OID644932277 
Productpeptidase dimerisation domain protein 
Protein accessionYP_003088797 
Protein GI255038176 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0204618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAATA GCACTTCGGA AAACATACAA ACGCTGTCCG CAGAGGCCAT CGCATTGTTG 
AAAAGCCTGA TCGAGACACC TTCATTCAGC AAAGAGGAGG AAAATACGGC AAAAATCCTG
GCTGATTTTT TTACCGGCAA GAACATCCCT TTTCATACCA AAAAGAATAA TCTCTGGGCT
TTCAACAAGC ATTACGATGC GAGCAAGCCC ACGATGCTGC TCAACTCGCA CCATGACACG
GTGAAGCCCA ATAAGTCGTG GACGCTGGAC CCGTTCAGGG CCATTGAGCA GGATGGAAAA
CTGTATGGCT TGGGAAGTAA TGACGCTGGC GGTTGCCTCG TATCATTGAT CGCAACATTC
GTTCATTTCT ACGAAAGAGA AGATATCACC TATAATATCG CCATCGCCAC CACCGCTGAG
GAAGAAATTT CAGGTAAGGA AGGACTCGAA ATCGTAGCGC CGGAATTGGG CGAAATCGCA
TTTGCCATCG TAGGCGAGCC GACCGAAATG CATTTGGCCG TAGCAGAAAA GGGCTTACTC
GTGCTGGATT GCACTGCAAA AGGCGTTTCC GGCCACGCGG CGCGCGAGGA AGGCGATAAT
GCGATCTACA AGGCGTTGAA GGACATTCAG TGGATTACGG AATACAAGTT TCCCAAAGTG
TCTCCAACAC TCGGCCCGAT CAAAATGTCG GTGACGATTA TCAATGCGGG TACGCAGCAT
AATGTGGTGC CTGACGCCTG CACATTCACG ATCGACGTGC GGGTGACGGA TCAGTATACT
TTGGAAGAGG TTATCTCGGA GATCAAGACG AATATCCAGT CGGAAGTAAC ACCGCGCTCG
ATCCGCTTGC GGCCATCCAG CATTCCAATG GACCATCCGA TCGTACTGGA AGGTTTGAAA
CTGGGCCGTA ATGCGTACGG ATCACCCACC ACTTCCGACC AGGCATTGCT CGATTGTCCT
TCTCTCAAAA TGGGTCCGGG GCATTCCGCA CGCTCGCATA GCGCGGATGA ATTCATTTAC
CTGCATGAAA TTGAAGAGGG GATTGCGCAG TATATTAAAA TGGTAGAGGG CGTGGTGACC
CGATAA
 
Protein sequence
MVNSTSENIQ TLSAEAIALL KSLIETPSFS KEEENTAKIL ADFFTGKNIP FHTKKNNLWA 
FNKHYDASKP TMLLNSHHDT VKPNKSWTLD PFRAIEQDGK LYGLGSNDAG GCLVSLIATF
VHFYEREDIT YNIAIATTAE EEISGKEGLE IVAPELGEIA FAIVGEPTEM HLAVAEKGLL
VLDCTAKGVS GHAAREEGDN AIYKALKDIQ WITEYKFPKV SPTLGPIKMS VTIINAGTQH
NVVPDACTFT IDVRVTDQYT LEEVISEIKT NIQSEVTPRS IRLRPSSIPM DHPIVLEGLK
LGRNAYGSPT TSDQALLDCP SLKMGPGHSA RSHSADEFIY LHEIEEGIAQ YIKMVEGVVT
R