Gene Dfer_4428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4428 
Symbol 
ID8228031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5345619 
End bp5346227 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content50% 
IMG OID644932274 
Productleucyl/phenylalanyl-tRNA/protein transferase 
Protein accessionYP_003088794 
Protein GI255038173 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.14508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAA TCAGTACCGA CGACCTCCTC AACGGCTATA TCAACGGCAT ATTCCCGATG 
GCCGAGGCCG ATGGTACTAT TTATTGGTAC TCGCCCAATC CGCGGGCAGT TATTCCTATC
GACACTTACA AACCATCCAA ATCACTCCGG CCGGTAATCA ATAAAAAGCA TTTCGACATC
CGAATCGACA CGGATTTCGA GGGCGTCATG CGCGGATGTG CGCTCCCTCG GGCGAGCGAG
CCGGGGACGT GGATTTCGGA GGAAATCATT GCTTCCTACA CCGCATTGCA TGAGCTCGGT
TATGCGCATA GCGTGGAGGC ATGGCGCGAG GGCCGGCTTG TGGGTGGATT GTATGGGGTT
TCCATTAATG GGGTGTTTTT TGGTGAATCA ATGTTTACGA TCGAGAGTAA TGCGTCGAAA
GTCGCATTTC ACTATTTAAT ACAGATCTTG AAAATGAACC GGTTTGCCTT GCTGGACACG
CAGTTTATTA ACGATAATGT GCTTCGTTAC GGCGCCATCG AGGTCCCGCG GGACGAATAT
CTCGACCAGC TTCACAAAGC ATTAAAGCTC AGGAGGAGGT TCAACGGTGC TGTTTTAAGC
GAATTATAA
 
Protein sequence
MSAISTDDLL NGYINGIFPM AEADGTIYWY SPNPRAVIPI DTYKPSKSLR PVINKKHFDI 
RIDTDFEGVM RGCALPRASE PGTWISEEII ASYTALHELG YAHSVEAWRE GRLVGGLYGV
SINGVFFGES MFTIESNASK VAFHYLIQIL KMNRFALLDT QFINDNVLRY GAIEVPRDEY
LDQLHKALKL RRRFNGAVLS EL