Gene Dfer_4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4417 
SymbolhemH 
ID8228020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5336877 
End bp5337950 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content53% 
IMG OID644932264 
Productferrochelatase 
Protein accessionYP_003088784 
Protein GI255038163 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA CCACATTGGC TCAACCCTTC GATACTACAA CTCTGAATGA CGTTCGTAAA 
ACGGGCGTTT TGCTCGTAAA CCTCGGCACG CCCGACAGCC CGTCGGTGCC CGATGTACGC
AAATACCTGC GCCAGTTCCT CATGGACGAG CGCGTGATCG ATATTCCGTA TGTGAACCGC
TGGTTTTTGA TCAACCTGGT CATCGCTCCA TTCCGCGCAC CGAAGTCTGC GAAAGTGTAC
AAGCAGCTCT GGCGGCCAGA CGGCTCTCCG CTGAAAACTT ATGGTTATTC GGTGAAGGAC
AAATTACAAA AGGTGCTGGG TGGTGATTAT GTGGTAGAGC TGGCGATGCG TTACCAAAAC
CCGAGCATTG AGAAGGCGCT GGTCGCATTG CGTAAGGAAT GCCTGACAGA GATCATCGTC
GTGCCATTTT TCCCGCAATA TGCTTCGGCG TCCACCGGCT CGGTGTACAA AGAGGTAATG
CGCGTGGTGA AAGACTGGGA AGTGCTGCCG GAGATCCGTT TCGTCAACCG TTTCCTCGAA
CATCCGAAGT TTATCAAGGG TTTCGTGGAT CTGGGTAAAA AATACATGGC ACAGCACGAT
TACGACCATT TCGTGTTCAG CTACCACGGC CTGCCCGAGC GACAGATCAC CAAGGGCGAC
GTGACGGGCA GCTTTTGCCA GTTCGGCAGC TGCTGCGACA AGCTCGATCA CCGCAATCAG
CATTGCTACC GTGCCCAATG CTTTGAAACA ACGCGTTTGC TCGTAAAAGG ATTAGGCATT
CCCGAAGGTA AATACACCAC CTGCTTCCAG TCGCGGCTGG GCAAAAGTCC GTGGATCAAG
CCTTATACCG ACGAGGTAAT CCCCGAACTG ACCAAGAAAG GCGTAAAAAG CGCATTGGCA
TTCTCCCCCG CATTCGTTGC CGACTGTTTG GAAACGACCA TTGAAGTAGG CGAAGAATAC
AAAGAGCTAT TCGAAAAGGA AGGCGGCGTG CATTGGCAGC TCGTCGAAAG CCTTAACGAC
AGCGACATCT GGGTCGAATG TCTGGAAGAT ATCGTAAAAA ACCCGGCCTC CTGA
 
Protein sequence
MSATTLAQPF DTTTLNDVRK TGVLLVNLGT PDSPSVPDVR KYLRQFLMDE RVIDIPYVNR 
WFLINLVIAP FRAPKSAKVY KQLWRPDGSP LKTYGYSVKD KLQKVLGGDY VVELAMRYQN
PSIEKALVAL RKECLTEIIV VPFFPQYASA STGSVYKEVM RVVKDWEVLP EIRFVNRFLE
HPKFIKGFVD LGKKYMAQHD YDHFVFSYHG LPERQITKGD VTGSFCQFGS CCDKLDHRNQ
HCYRAQCFET TRLLVKGLGI PEGKYTTCFQ SRLGKSPWIK PYTDEVIPEL TKKGVKSALA
FSPAFVADCL ETTIEVGEEY KELFEKEGGV HWQLVESLND SDIWVECLED IVKNPAS