Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4407 |
Symbol | |
ID | 8228010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5325250 |
End bp | 5326437 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644932254 |
Product | 2-amino-3-ketobutyrate coenzyme A ligase |
Protein accession | YP_003088774 |
Protein GI | 255038153 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase [TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACGGCA ACATTCAGGA ACAACTTGCC AGCGAGCTCG AAGCGATCCG TTCGGCGGGG TTATATAAGA AGGAACGCGT GATTACCACG CCGCAGGCTG CGCACATTGC TACTACCGAT GGCGCGGATG TGCTTAATTT TTGTGCAAAT AATTACCTCG GCCTGTCGTC GCATCCCGAT GTGATCCAGG CGGGTATCGA TGCGATCCAT TCGCATGGCT TCGGTATGTC GTCAGTGCGG TTTATTTGCG GCACGCAGGA TATTCATAAG GAGCTGGAAC GCAAAACAGC CGAGTTCCTG GGAACCGAAG ATTGCATTCT CTACGCAGCG GCTTTTGATG CCAATGGCGG CATTTTCGAG CCGTTGCTGA ACGAGCAGGA TGCCATCATC TCCGACGAGC TGAACCACGC GTCGATCATC GACGGCGTGC GCCTTTGCAA AGCCAAGCGT TTCCGCTACA AGCATAACGA CATGGCCGAC CTTGAAAAGC AGCTGCAAGA TGCGCAGGGG AGTCGCCGCA TTCTGGTGGT GACCGACGGC GTGTTCTCGA TGGACGGCAC CATCGCCCGC CTTGACCAGA TCTGCGATCT CGCCGAGCAA TATCAGGCCA TGGTAATGAT CGACGAGTGC CATGCCACGG GCTTCATGGG CAAAACCGGT CGCGGCACGC ATGAGTACCG CAACGTCATG GGCCGCATTG ATATCATCAC CGGCACCTAC GGCAAGGCGT TGGGCGGCGC TTCGGGCGGT TTTACGGCCG CCAAAAAGGA GATTGTCGAG ATCCTCCGCC AGCGCTCGCG GCCCTATTTG TTTTCCAATA CACTGGCGCC TTCCATCGTA GGCGCGTCCA TTAAAGTACT CGATTTACTC ACCTCATCCA CCGCACTGCG CGACAAGCTG GAACGGAATA CGCAATATTT CCGCAAAGCC ATGACCGACG CAGGTTTCGA CATTCTGCCG GGCGAGCACC CCATTGTCCC CATCATGCTC TATGAAGCTA CATTAGCACA GGATTTTGCC GCCAAACTGC TTGCCGAAGG CATTTACGTG ATCGGTTTCT TTTATCCTGT TGTGCCGCAG GGTAAGGCGC GCATCCGCGT GCAGATCTCG GCCGGGCACG AGCAGGAAGA TCTCGAAAAA GCCGTGGCGG CATTTACCAA AGTAGGTAAG GAGCTGGGTG TGATTTAG
|
Protein sequence | MYGNIQEQLA SELEAIRSAG LYKKERVITT PQAAHIATTD GADVLNFCAN NYLGLSSHPD VIQAGIDAIH SHGFGMSSVR FICGTQDIHK ELERKTAEFL GTEDCILYAA AFDANGGIFE PLLNEQDAII SDELNHASII DGVRLCKAKR FRYKHNDMAD LEKQLQDAQG SRRILVVTDG VFSMDGTIAR LDQICDLAEQ YQAMVMIDEC HATGFMGKTG RGTHEYRNVM GRIDIITGTY GKALGGASGG FTAAKKEIVE ILRQRSRPYL FSNTLAPSIV GASIKVLDLL TSSTALRDKL ERNTQYFRKA MTDAGFDILP GEHPIVPIML YEATLAQDFA AKLLAEGIYV IGFFYPVVPQ GKARIRVQIS AGHEQEDLEK AVAAFTKVGK ELGVI
|
| |