Gene Dfer_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4378 
Symbol 
ID8227981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5291514 
End bp5292407 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content52% 
IMG OID644932225 
ProductPolyphosphate:AMP phosphotransferase 
Protein accessionYP_003088745 
Protein GI255038124 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.273291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACT TCAATTCGGA TGATTATCGC TACGACGGTA GCAAGAAGTT TGAGATCAGT 
AAAGCCAAAA CGCGCTTTAA AGATATTTAT GCCGATAAGG CCGAATACGA GGCCATGCAG
GATGAATCGG CGAAGGAGCT GGACGAGTTG CAGAGCATGA TGTACGCGCA CAACCGGTAC
GGATTGCTGG TGATCTTTCA GGCGATGGAC GCGGCCGGTA AGGACGGCAC GATCAAACAC
GTGCTTTCAG GCGTAAACCC GGTGGGGGTA AAAATCCATT CGTTCAAAAG GCCTACCGAT
ACCGAGCTTG GACATGATTT TTTGTGGAGA ACGAACCTGG TACTGCCTCA GCGCGGCACG
ATCACGATCT TCAACCGCAG TTATTATGAA GAAGTGCTGG TCGTGAAAGT GCAGCCGGAA
ATCCTCACGC AATCGCAGCG CCTTCCGACG GAGCTGACCG AAGATCTTGA CAAGCTCTGG
AAACACCGCT ACACCGACAT CCGCAACCTG GAAAAATACC TCTACCGGAA CGGCATTCGC
GTGATCAAGT TCTTTTTGAA TGTATCGAAG GAAGAACAGG CCGAACGGCT GATCGAACGC
ATTGAGGACC CTTCCAAAAA CTGGAAGTTC GAGGAGCAGG ACGTAAAAGT ACGCGACCAA
TGGGCCGAAT ACATGCAGGC ATACGAAGAT TGCATTAATG CCACCGCATC CAAAAAAGCA
CCATGGTTCG TGATTCCCGC CGACGACAAG AAGAACCTCC GCCTGACGGT GGCCAAGATC
GTCGCCGAAG AATTGAAGAA GATGCACATG AAATACCCCG AATCGGGCCC ACAGCGGACC
GAGGAGCTCC GGCATTTCAT CGACATCATC AATGCCCAAA CGAACCAGCC ATAA
 
Protein sequence
MSDFNSDDYR YDGSKKFEIS KAKTRFKDIY ADKAEYEAMQ DESAKELDEL QSMMYAHNRY 
GLLVIFQAMD AAGKDGTIKH VLSGVNPVGV KIHSFKRPTD TELGHDFLWR TNLVLPQRGT
ITIFNRSYYE EVLVVKVQPE ILTQSQRLPT ELTEDLDKLW KHRYTDIRNL EKYLYRNGIR
VIKFFLNVSK EEQAERLIER IEDPSKNWKF EEQDVKVRDQ WAEYMQAYED CINATASKKA
PWFVIPADDK KNLRLTVAKI VAEELKKMHM KYPESGPQRT EELRHFIDII NAQTNQP