Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4363 |
Symbol | secY |
ID | 8227966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5279091 |
End bp | 5280404 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644932210 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_003088730 |
Protein GI | 255038109 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0120386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.169527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAT TTTTAGAGAC TATTAAACAC ATATTTGCGA TTGAGGAGTT GAGAACACGT ATTCTCAACA CTCTTTTGTT TATAACGATC TTCCGGTTGG GGTCTTACGT TGCGTTGCCA GGTGTTGAGC CTGATCAAAT GAATGTATCC TCCGCAGGAT TGTTGGGGTT GCTCGATACT TTCTTAGGTG GCGCTTTTAG CAAAGCGTCC ATTTTTGCGT TGGGTATCAT GCCTTACATT TCTGCTTCCA TTGCAATCCA GCTTCTGACC ATGGCATTGC CGTATTTCCA GAAGATGCAG AAGGAGGGAG AATCAGGACG TAAGAAACTG AACCAAATTA CCCGGGTTCT GACTATCGTT GTTACACTTG TTCAAGGTAC TGCTTATTTG AATACGACTG TACCTGACGA GGCTCTTCTG GTTTCCAGAA GCATGTTCAC CATCTCGTCT GTATTCGTAT TGACGGCTGG TACAATGTTC TGTATGTGGC TTGGTGAAAG AATCACAGAC AAGGGTATTG GTAACGGTAT TTCGATGCTG ATCATGATCG GTATCGTTTC GCGTTTCCCT GGTGCGATCT ACAAAGAGTT CGTATCAAGA GGCAGCGGCC AGATTCTGTT GTTCGTATTG GAAATCGTTG CCCTCTACTT TGTAATTATG GGCGCGGTAA TGTTGACCCA GGCTGTTCGC CGTATTCCTA TCCAATATGC CAAGCAGGTG GTAGGTAACC GCGTAATGGG TGGTCAGCGC CAGTATTTGC CATTGAAATT GAATGCAGCA GGTGTGATGC CGATCATTTT CGCTCAGGCT TTGATGTTTA TTCCTTCACT GGGAGCATCT TACTTCGCCG AAAAAAGTGA TTTTGCCAGC AACGTAGCAA CGATTTTCGC TAACTACACG ACCTGGCAAT ATAACCTCCT GTTCGCAGTA TTGATTATTG TATTTACGTT CTTCTACACC GCGATTTCGG TGAATCCTCA GCAAATTGCT GATGACATGA AGCGCGGCGG CGGATTTATC CCGGGTGTGA AACCAGGTCA GCAGACATCT GAATATATCA GCTCTGTGCT TGACCGTATC ACCTTCCCAG GCGCGTTGAT GCTCGCAGTA GTTGCTACTC TGCCTGCATT CGCAAGCCTT CTGGGTATCT CGACCGACTT TGCTCACTTC TTCGGAGGAA CTTCATTGCT GATCATGGTA GGTGTGGTTC TGGATACTTT GCAACAAGTT GAAAGCTACT TGCTCATGCG TCGCTATGAA GGTCTGATGA AGTCGGGACG TGTAAAAGGA CGCACCGAGA GCGTAGCAAT CTGA
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Protein sequence | MKRFLETIKH IFAIEELRTR ILNTLLFITI FRLGSYVALP GVEPDQMNVS SAGLLGLLDT FLGGAFSKAS IFALGIMPYI SASIAIQLLT MALPYFQKMQ KEGESGRKKL NQITRVLTIV VTLVQGTAYL NTTVPDEALL VSRSMFTISS VFVLTAGTMF CMWLGERITD KGIGNGISML IMIGIVSRFP GAIYKEFVSR GSGQILLFVL EIVALYFVIM GAVMLTQAVR RIPIQYAKQV VGNRVMGGQR QYLPLKLNAA GVMPIIFAQA LMFIPSLGAS YFAEKSDFAS NVATIFANYT TWQYNLLFAV LIIVFTFFYT AISVNPQQIA DDMKRGGGFI PGVKPGQQTS EYISSVLDRI TFPGALMLAV VATLPAFASL LGISTDFAHF FGGTSLLIMV GVVLDTLQQV ESYLLMRRYE GLMKSGRVKG RTESVAI
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