Gene Dfer_4358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4358 
Symbol 
ID8227961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5276870 
End bp5277427 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content47% 
IMG OID644932205 
Productribosomal protein L6 
Protein accessionYP_003088725 
Protein GI255038104 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000653626 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.128758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGAA TAGGAAATAA AGTTATCACG TTGCCGGCGG GAGTATCCGT ATCGGTTGCA 
GACGATAACG TAGTATCTGT AAAAGGCCCG AAAGGCACAC TTACCCAGGC TGTCGACAGC
GATATTACTG TTGAAGTTGA AGGTAGCGAG CTGAAAGTAA AGCGCCCTAC AGAGCAAAAG
CGTCACAAAG CATTGCACGG CCTTTACCGT TCCCTGTTGA ACAACATGGT AATCGGTGTA
GGCGAAGGTT ACAAGCGTGA GCTTGAAATT ATCGGGGTAG GTTACAAGGC GAGCTCGGCG
AACAATGTTC TCGAACTTCA ATTGGGTTAC TCGCACAACA TCTTCATGGC GATCCCCGAA
GAGATCAAAG TGGTGACGAC CTCAGAAAAA GGTCAGAACC CTAAGGTGAT CCTGGAAGGT
ATCGACAAAG AACTGATTGG TGCAGTAGCG GCGAAAATCA AATCCCTCCG CAAAGTTGAG
CCTTACAAAG GAAAAGGTAT CCGTTTTGTT GGTGAAGTGG TCCGTCGTAA GGCAGGTAAG
TCTGCTTCTA AGAAATAG
 
Protein sequence
MSRIGNKVIT LPAGVSVSVA DDNVVSVKGP KGTLTQAVDS DITVEVEGSE LKVKRPTEQK 
RHKALHGLYR SLLNNMVIGV GEGYKRELEI IGVGYKASSA NNVLELQLGY SHNIFMAIPE
EIKVVTTSEK GQNPKVILEG IDKELIGAVA AKIKSLRKVE PYKGKGIRFV GEVVRRKAGK
SASKK