Gene Dfer_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4340 
Symbol 
ID8227943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5266204 
End bp5266671 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content48% 
IMG OID644932187 
Product30S ribosomal protein S7 
Protein accessionYP_003088707 
Protein GI255038086 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.30257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.435501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGT CGAAACCTAA GAAAAGATAT ATCCTTCCTG ATCCGAAGTT CAGGGACGTA 
CAGGTTACCA AATTCGTTAA CAACCTGATG TACGAAGGAA AGAAGAGCAT TGCGTTCACT
ATTTTCTACG ATGCATTGGA ACTGGTTGAG AAAAAAACCA GCGAAAATGG TCTGGAAACA
TGGAGAAAAG CATTAAACAA CGTGACTCCA TCCGTAGAGG TGAAGAGCCG TCGCGTAGGT
GGTGCTACTT TCCAGGTTCC TACCGAAGTT CGTCCTGAGC GCAAGCAGTC ACTGGGCATG
AAATGGTTGA TCAACTACTC CCGCAAGCGT GGCGAGAAGA CAATGGTTGA CCGTCTGGCC
GGCGAAATCA TCGCTGCTGC GAAAGGTGAA GGTGCTGCTG TGAAGAAGAA AGACGATACG
CACCGTATGG CAGATGCCAA CAAAGCGTTC TCGCACTTCC GTTTCTAA
 
Protein sequence
MRKSKPKKRY ILPDPKFRDV QVTKFVNNLM YEGKKSIAFT IFYDALELVE KKTSENGLET 
WRKALNNVTP SVEVKSRRVG GATFQVPTEV RPERKQSLGM KWLINYSRKR GEKTMVDRLA
GEIIAAAKGE GAAVKKKDDT HRMADANKAF SHFRF