| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4337 |
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| Symbol | |
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| ID | 8227940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5261972 |
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| End bp | 5263162 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932184 |
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| Product | Deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_003088704 |
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| Protein GI | 255038083 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | [TIGR02765] cryptochrome, DASH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.660905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAC GCATTATCTA TTGGTTCAGG AATGATTTGA GGTTAAAAGA TAACCAGGCG
CTTTCTGCCG CCGTTGGCTC CGCCGACGAG ATCATACCGG TGTATGTTTT TGATCCCCGT
CAATTTGAAA AAACAAAACT AGGCTTCCGC CGCACGGGCG CATTACGCGC ACGCTTCCTC
ATCGAATCCG TGGCGGAACT CCGCGAAAAT ATCCGGCAAA AGGGCGGCGA TCTGATCATC
CGCACAGGCG CGCCCGAAGC CATCGTAGCC CAGCTCGCCG AAGATTACAA TGCCGACTAC
GTGTACACAA GCAAGGAAAT CGCGCCGCAG GAAACGCGCA TCGAATCGTC ATTGAGCAAA
AACCTCAAAA CAGCCAATGT GGACATTAAG CTGTTCTGGA TGGACACGAT GATCAATGCA
ACCGACCTGC CGTTTCCGGT ATCGAAGCTC CCCTCGGGCT TTGCGGAATT CGAGCGGCTG
CTGAGCAACG ATCTTAAAAT CAAAGACCAG TTTCCCACGC CGGCAAGCAT TACTTTACCC
GCCGACGTAG AAGCAGGAGC CATTCCTGGC CTTCCCGAGC TGGGTATCGA CCCGAACGAG
ATCCCGGCGG GAACAACAGG CCCTTTGGCC GGAGGTGAAG CGCGTGCATT GGCTGTTCTC
AAAGAATATG TGGAGGAATA TGTTAAAAAA GACATCGCCT ACCCTTCCGC CGAGCCGCTT
ACCGACACGC GCCTGTCCGA CTGGCTTTCT CTGGGATGCG TTTCGGCATC GTACATCTAT
CGCAGCGTAA AAACCGCGCA ATCGCACGCC GTAGTGGAAG ATCCGATCAT TACCAACCTG
CTAAGAAGGG AATTCCTGCA TTGGACATTG CTCCGTTTCG GCCCGCGGAT GTTCAAACCC
AGCGGTGTAA AACATCATTT CAACCGCCGT TGGAAAAATG ATAATGCAGC GTTTGAAAAA
TGGATCAATG GGCAAACCGG CGACCAGTCA ATAAATGACA TCATCCGCAG GCTAACCGCA
ACCGGCTTCA TTACCGCCGC TGAACGCGAG TCGGCCGCGC GGTACCTGGT GGACGACCTG
GATATCAACT GGACCTGGGG TGCTATGTAT TTCGAAAGCC TGCTGATGGA CTACGAAGCA
TCTGTGAACT GGGGCCGCTG GAACCATATC GCAGGAGTGG GTGAAGACTA A
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| Protein sequence | MARRIIYWFR NDLRLKDNQA LSAAVGSADE IIPVYVFDPR QFEKTKLGFR RTGALRARFL
IESVAELREN IRQKGGDLII RTGAPEAIVA QLAEDYNADY VYTSKEIAPQ ETRIESSLSK
NLKTANVDIK LFWMDTMINA TDLPFPVSKL PSGFAEFERL LSNDLKIKDQ FPTPASITLP
ADVEAGAIPG LPELGIDPNE IPAGTTGPLA GGEARALAVL KEYVEEYVKK DIAYPSAEPL
TDTRLSDWLS LGCVSASYIY RSVKTAQSHA VVEDPIITNL LRREFLHWTL LRFGPRMFKP
SGVKHHFNRR WKNDNAAFEK WINGQTGDQS INDIIRRLTA TGFITAAERE SAARYLVDDL
DINWTWGAMY FESLLMDYEA SVNWGRWNHI AGVGED
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