| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4332 |
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| Symbol | |
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| ID | 8227935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5257224 |
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| End bp | 5258717 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932179 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_003088699 |
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| Protein GI | 255038078 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAC AGATTTCCCA AAAACACCCC AAAGGACTGT ATGTCTTGTT CTTTGCCGAA
ATGTGGGAAC GTTTCAGCTA TTACGGAATG CGGGCCATTC TTCTGCTTTT CCTACTCGAT
AATATCAAGG GTGGAATGGG AATGAGTGCA GCCGAAGGCA CGGCTATCTA CGGACTTTAT
ACGGCGTCCG TTTACTTGCT CACATTGCCC GGCGGCTGGT TGGCGGATAA CATTCTGGGC
CAGAAAAAGG CGATCTGGTA CGGGGGGATC ATCATCATGC TCGGCCACAT TATACTGGCC
ATACCGGCCG GCTCGGCCAT CTTTTTTCTG GGATTGAGCA TTGTCGCCGT CGGCACGGGA
CTTTTGAAAC CCAACATCAG CTCCATTGTG GGTGAACTCT ACCCGGAAGG CGGCGCACGG
CGCGACGCGG CATTCTCTAT CTTTTATATG GGAATCAACC TGGGCTCATT CCTCGGCATC
CTCATTGTAG GCTACCTTGG CGAGAAAGTC AATTGGCATA TGGGTTTTGG TGCGGCTGCG
GTGGGCATGT TACTCGGCCT GATCGTGTTC CGTTATGGAA GCGCCACCCA CCTGAAAGGG
CTCGGTGATG TACCGCCCGC GGAAGAGGCT GGCGAACAAG CCGCCGCATC GCCGTCGGGA
GGCAACAAAA TGCTGGGTTA CGGCCTGATC GCCCTGCTCG TGGTGTTCCT GGTAGTGCTG
CAATCGTCGG GAACCATTGA CATGACGACC GCGCAAGGCC TTGCACAGGG AGCCGGCATT
ATCATCGTGT CCATTTCCGC CGCTTACTTC CTGTTCATTC TCGTGGCGGG AGGGCTTACA
CGCGTGGAAA AATACCGCGT GGGCGTACTG ATCATTCTCT TCCTGGCTAT CGCATTGTTC
TGGGCGGGTT ATGAACAGGC AGGCACCTCA CTACAGATCT TCGCCGAACG CCACACCCAA
CGGAACATCG GCGGTTGGGA AGTGCCATCG AGCTGGTTTC AGAATTTCCA GCCTACATTT
GTATTGATTT TTGCACCCGT ACTCGCGAGT CTCTGGATTT CGCTTTCATC CCGGAACCGT
AACCCGTCCA TCCCCGTCAA GTTCGCGATG GGCCTGATAT TGCTCGGATT GAGCTTTTTC
GTGATGGTAG CGGCCTCCAA CATTGCCGTA CAAGGGGACC TGGCATCGCC GTTTTTCCTC
ACATTTACCT ATTTCCTGCA CACAATCGGA GAGCTTTGCG TAAGCCCTGT AGGGTTGAGT
TCTTATACCA AACTGGCGCC AAAGCGCTAC CTCAGCCAGC TGATGGGCAT CTGGTTCGTG
GGCGCATCGC TCGGCAACCT CATCGCCGGA ATATTCGCGG GAGGGTTCGA CGAGTCCAAT
ATCCTGCAAA TGCCGGCATT GTTCAATCAG GTCGCCATTG TGACCACCGT CTTCGGCCTC
ATATTGCTCG CCTTCTGGAA GCCGATCAAG AGCTGGATGG GAGGAATCCA CTAA
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| Protein sequence | MSSQISQKHP KGLYVLFFAE MWERFSYYGM RAILLLFLLD NIKGGMGMSA AEGTAIYGLY
TASVYLLTLP GGWLADNILG QKKAIWYGGI IIMLGHIILA IPAGSAIFFL GLSIVAVGTG
LLKPNISSIV GELYPEGGAR RDAAFSIFYM GINLGSFLGI LIVGYLGEKV NWHMGFGAAA
VGMLLGLIVF RYGSATHLKG LGDVPPAEEA GEQAAASPSG GNKMLGYGLI ALLVVFLVVL
QSSGTIDMTT AQGLAQGAGI IIVSISAAYF LFILVAGGLT RVEKYRVGVL IILFLAIALF
WAGYEQAGTS LQIFAERHTQ RNIGGWEVPS SWFQNFQPTF VLIFAPVLAS LWISLSSRNR
NPSIPVKFAM GLILLGLSFF VMVAASNIAV QGDLASPFFL TFTYFLHTIG ELCVSPVGLS
SYTKLAPKRY LSQLMGIWFV GASLGNLIAG IFAGGFDESN ILQMPALFNQ VAIVTTVFGL
ILLAFWKPIK SWMGGIH
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