Gene Dfer_4328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4328 
Symbol 
ID8227931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5251753 
End bp5252583 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content54% 
IMG OID644932175 
ProductROK family protein 
Protein accessionYP_003088695 
Protein GI255038074 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG GTGTAGATAT CGGTGGCACG AACATCCGTG CCGGTATCGA ATCGGGTGGC 
CATATTACCC GGCAAAATCA GACATTACTG GCCAACAAAC ATTCGCTGTC GGCAACGCTC
GACCAACTGA TGGACGTCAT ACGTCCGTTG ACGGCCTTTC CCGTAAAGGG CATCGGAATC
GGTGTGCCGT CGGTGGTGGA TATTAGCAAG GGCATTGTGT ACAACGTGCT GAACATCCCT
TCGTGGGAGG AAGTTGCGCT GCGCGATATT GTGGAAAAGG AGTTCAATCT GCCGGTTTCG
GTGAACAACG ATGTGAATTG CTTCGTCCTC GGCGAGCATC GGTTCGGGCT GGCGCGGAAA
TTCCGGTCGG TGATCGGGAT GGCAATCGGT ACGGGGCTGG GCTCGGGCAT TATCATCGAC
AATCATTTGT ACGCAGGCAA GAACTGCGGC GCCGGCGAGA TCGGGATGCT GCCCTACAAG
GATTCGGTGC TCGAAAATTA CGTCTGCAAC CGTTTTTTCG AAGATTCACT CGGCATAGAC
GCCTATGCGG CGCACGAGGC GGCCTTGCAG GGGAATAGGA AGGCGATCGA AGTATGGGAG
GAATTTGGCG TGCATTTGGG AGCGGTGATC AAGGCGATTA TGTACACCTA CGATCCCGAA
GCCATCGTGA TGGGTGGCTC CATTGCCCAG GCCAACCGGT TTTTCCAGGA AAGTATGCTG
GAAAGTATCC AGGATTTCGC TTATCCCGAG TCTTTGAAGA AGTTGACATT GCTGATATCC
GAAAACAAAA ACATCGCTTT GCTCGGTGCG GCAGCATTGC TGGGCGATTG A
 
Protein sequence
MNIGVDIGGT NIRAGIESGG HITRQNQTLL ANKHSLSATL DQLMDVIRPL TAFPVKGIGI 
GVPSVVDISK GIVYNVLNIP SWEEVALRDI VEKEFNLPVS VNNDVNCFVL GEHRFGLARK
FRSVIGMAIG TGLGSGIIID NHLYAGKNCG AGEIGMLPYK DSVLENYVCN RFFEDSLGID
AYAAHEAALQ GNRKAIEVWE EFGVHLGAVI KAIMYTYDPE AIVMGGSIAQ ANRFFQESML
ESIQDFAYPE SLKKLTLLIS ENKNIALLGA AALLGD