| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4322 |
|---|
| Symbol | |
|---|
| ID | 8227925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5238119 |
|---|
| End bp | 5243512 |
|---|
| Gene Length | 5394 bp |
|---|
| Protein Length | 1797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644932169 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_003088689 |
|---|
| Protein GI | 255038068 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000460936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGGA AAAATCTTTA CTACACACTA TTGCTGACTA GCTCACTGAT CGGCAATGCA
ACTGCGCAGC AGCGCAAAGA CTACGAAATC CTCCTGCGAA GCGGCTCTTT TGTGCCGCAG
CAAAACGTCG CGTCCGCCGG CAGTCGGACC AGCGCGGCGT TCAGGCTCGC CAACGATGGC
CAGAAGTCGT TCGTGATTAT TCAGTTCGAC GATATTCCGA CCGAGGACGA GCGGCGCGAG
CTGAAACGGG AAGGGATAGA GCTGCTCGAA TATCTGCCGA ACTATGCTTA CACCGCCACA
ATCGGGGCGG GAAGCAATCC CGGCGCATTG GCCAGGACCA GGGGACGGGC CATTATCGAG
CTCAATGCCG AACAGAAAAT GGAGCCCTCA CTCGCCAATG GCCGCATTCC TTCCCACGCG
TTCGTCAGCC CCACAACGGT AGACTTGTGG ATCAGCTATC CCAGGTCGTT CAGCTATGAG
GAAATTAAGG CAGCTTTGCA GGCCCGCGGC GTTGAGATTG TTGCCGACGA CTTCAAAAAA
TACCAGGTGC TCACCGTGCG GATTCCCGCA AAAGAGCTCA AAAGCCTCGC CAGCCAGCCT
TTTATCCAAT ATGTGCAGGC ATTGCCGCAG CCCGACCGTC AGCTGAACAG CAAGAGCACG
GTCAACGGCC GCGCCAATGT TCTGAAATCG GCCTTACCCG GGAACCGTAA CCTTTCGGGT
GCGGGCGTAG TAGTCGGCAT TGGCGACGAA TCCAACCCAT TGCGGCATAT TGACTTCAAC
ACGAGGATCA TCAACCGCGC GCCGATCGAC GGCGGGTCGC ACGGGCTTCA TGTGATGGGC
ACGATGGCGG GCGCCGGCAT TATGGAAGAG CGAAATGCAG GTTATGCACC CAAAGCGACG
GTTGTAGCGC AAAGCTATTC GTCCATTTTG GCGTATTCTC CGCAATATGT GCAGGATTTC
GGTATGGTGA TTACCAACAA TTCCTACGGT TCGGATGTGG TAACCTGCGA GACAAACGGC
GTTTATGACC TGTACTCCTA CATTCTGGAC CAGCAGGCAT TTGATATGCC GTACTTGCAG
CACGTTTTTG CGGCAGGTAA TAGCGGAAAA ATCACTTGCG CCCCTTTCGC AGCGGGATTT
GCCACGGTTC TCGGCGGGTA TCAGACGGCC AAAAATGTGA TTACGGTCGG TGCAACCAAT
GAAACCAGTG CCATTTATTC CGAATCGAGC CGCGGGCCGG TGAAAGACGG ACGGGTAAAG
CCCGAGATTA CGGCACAAGG TTCGGTAATC GTTTCAACTG TACCTACAAA CTTATATACC
AACGGCAGCG GCACGAGTAT GTCTTCGCCG GCTGTGTCGG GTGGTCTGGC GCTACTGTAC
GAGCGCTACC GCCAGCTGAA TGGGAACCAG AACCCAAAGA ATGGCCTGAT GAAAGCCCTG
CTCGTGAACG GGGCAGTGGA CCGGGGTAAT GAAGGACCGG ATTACCGTTT CGGATTCGGC
TGGCTCAATC TGCTGCGATC GGTGAAAATG CTCGAATCGC AGAGTTACAA AACGGACCAG
GTGTCGCACC AGGGAATCAA CAATTTCGCT ATTGATGTGC CCGCGGGTAC GGCTCAGCTA
AAAGTAATGC TGTACTGGAA CGATCCCGCC GGTTCGATGC TCGTATCCAA AAACCTTGTC
CACAACCTCG ATTTGCAGGT TATTAATCCT TCGTCCAATG CAGTGAATCC GCGGATACTC
AATCCCGCCG CGGCTCAGGT GAATGCGGTT GCCGGTACGG GTGTGGATAA TGTGAATAAT
ATGGAGCAGG TAGTGATCAA CAACCCGGCG CAGGGAAGTT ATACGATTTC CGTCAAAGGC
AGCACCATAG GACAGTCGCC GTCACAGGAA TACTTCGTTG TTTATGACAT TATCCCCAAT
TCCATCACCC TGACAAACCC CGTTGGAGGC GAGCGCATGA AAGATGGTGA CGCGACTCTC
ATCTCCTGGG ATGCATTCGG GAATAGCAAC AGCACATTCA CGGTCCAATA TAGCGTGAAC
GACGGACAGA ACTGGACGAA CATTTCAACC TCGGTAGCCG CAGGAACGAG CCAGCTCAAC
TGGGTGGTGC CAGCCGGTAC GAAATCCGAG AAGGTGCGCG TGCGCGTTAC CCAAAACAGC
ACCGGGGCGC AAAGCGTTTC TGAGCCATTT ACGGTGATCG GCGTGCCCGG CGTTACCCTT
TCCAGCTTGC AATGCGAAGG CTATATTTCG GTAGACTGGA CGGCGGTTTC GGGCGCCACA
GACTACGAGG TGATGGTGCT AAAGGGCAGC GAAATGGTGC CGGTAGCCAC CACCACGGGC
GTTAATTATA CATTCAGCGG ACTGTCAAAG GACTCCACGC ATTATGTTTC GGTGCGGGCG
CGGATCAATG GAAAGCCAGG CAGAAGAGCC CTGGCTATTT CTCGCAAGCC GGACACCGGA
ACCTGCGCAG GATCGATTTC CGATAATGAC CTGAAAGTGG AATCGATTCT GACACCGGCG
TCTTCGGGGC GGAAAAATAC TTCGTCGGCA CTCACCAGCG CCGTTTTTGT GAAAATCAGG
ATCAAAAACC TCGATGATGT CGATTTTAAC GGGCCACTCG ATGTCGGATA TCTGCTGAAT
GGCATGGCCG TTCCGGTTGA AACCATCAAT CCTTTTATCG AAAAAGGAAA GACTTACGAC
CACACTTTTG CGGTAGGGGC GAATCTGGCC GATGTCGGAA ACTACACTTT CAAAGTATAT
ATCCACGGAA ACCAGGACCT GGTTGCGGCG AACGATACAA TCACGAAAAC GTTCAGGCAG
TTGCCTAATG ATCCGATTGC ACTGCCGTAT GAAGACAATA TGGAAAACCT GCCCGTTCAG
AGCGTAACCC TCACCCAAAT GGGCCTCACC GGCGACGGGC GCTACGATTT CAGCGCGAGC
AGCAACGACG CAGGAAGGAT CAGGACGTTT GTCAACTCCG GTTTCGCGGC CTCCGGCCAG
AAGGCGCTCA CACTCGATAC CAACCGGCCA TTTCCTGTCG GCAACACGAC CTATCTCACC
GCGACCTACA ATTTGGGCGA ATACGATATC AACACACATG ACCTGCGCCT GGTATTTTCG
TATAAGAACC ATGGTCAGAA GTCAAATGAC AACAACAGAG TATGGATAAG AGGAAAGGAC
TCCGATACCT GGATTGAACT GTACAATCTT TTTGCAAACC AAAACCTTTC TACCGAAGGC
TACAAAACCA CGGTGCCGCT GGAAATGAGC GGACTGCTTG CCGCGAATGC CAAAAACTTC
TCTTCCAGCT TTCAGGTGCG CTGGGGGCAA TGGGGCAAAA TGCTCACTTC CGATTACAGC
AACGGCGCCG GCTACTCCTT CGATGACATC CGTATCATTT CGGTAACGGA CGACATTCAG
ATGATCAGCC TGCTCGCTCC GCCCACGGAA AGCTGCGGCC TCGGCAATGC CGAATCCATC
GCCGTGAGGA TTCGCAACAG CTCCGCACGA GACATTAGCG ACATTCCGCT GGTACTATCG
CTGCCCGACG GCACCGTGAT CCTCGACACC ATTCCGCTGA TCGCGAAACG AAGCACGATC
GATTTTACAT TCAACCAAAA AGCGGATCTC TCGGAAATCG GCGCTTTGGA CATCAAGGCC
TGGGCCGCAT TGCCGACAGA CAGTTTCCGC GACAACGACA CGCTTTCCGT GAAAGTTTTC
AATGCACCGG TACTGAGCAC ATTCCCTTAC CTGGAAGATT TTGAAAACGG CGACGGCTTT
TGGAGCGCCA AAGGAACCAA CAGCTCATGG CAATACGGAA CGCCGGTTTC GAGCGTGGTA
AACAAGGCTG CGAGCGGTAC GAAAATCTGG AAAACAAATT TGTCCGGCGG ACATAACGAC
AAGGAAGAAT CTTACCTGTA TTCCCCTTGC TTCAATGTAA GCAGTCTCAC GTCGCCTACA
TTGAGTTTCA GTGCGGCAAT CGACCTCGAA GTGTGCGAGC CTACGCCCTG CGACTATGTA
TATGTGGAAT ATTCGGGTAA CAACGGTCCC TGGACGCGCC TCGGTGCGGT AGGCCAGGGT
ACCAACTGGT ATAACAAAAC ATATTCGGGG AAAGGCGCGT GGGCGTTGCA GAACTATGTG
CGCTGGCACG TGGCGAGCAT GGCCCTGCCT ACCGGTTTTA CCAACCTGAA AATACGCTTT
GTATTGATTT CAGATGGCTT CACGCACCGC GAAGGCATCG CGCTGGACGA CATTCACATT
TTCGACAACG TGTCGCCTAT CCACGACAGC AGCAACGGCG TGGCGACCCA GCAGGTATCG
GGTTCGGGAT GGGTCAATTT TGTCCAGAAT GGCAAAATGC TGGCCTCCAT CAATGCAAAT
GGCCAGAGTA TGGGCAATAC GGAGGTACGG AGCTATGTGA ACACCACGGG AGTGAGAAAC
GGAAATGGCC ATTACTACCT CGACCGGAAT TTCACGATCA AGCCGGCCAA TGCCAACCTT
GCCAATTTCG CGACAGTAAG GTTTTACTTC CTCGAAACCG AAAGCGAGGC GCTGATTAAT
GCCGTGGGCT GCGCGAGTTG CGGCAAACCG GCGAACGCAT TCGAATTGGG TATTTCTCAA
TACAGTAACC CGATCAACAC TTCCAAGGAG GACGGCTCGC TCATTAACAG CACCGAAGGC
GGCTGGACCT ACCACCCCGC GGAAGAAGTA AAGCTTGTGC CTTACGACAA AGGATACTAT
CTCGAAATGA GCATGAAAAC TTTCTCGGAG TTCTGGATTG CCAAGGGATT TGTCGGAAAC
CCGGGGGCTC TGCCGGTGGA ACTGGTGAAT TTCAATGCGC GCAAAAAACA GGATGCTGAG
CAGTCAAAAG ATGTGATAGT GGAATGGGAA ACGGCTTCCG AAGAGAATTT CGACCATTTC
GCCATCGAAG TTGCGGCTGG TGACGACGCG TACCGGCAGG GGCGTTTTGT GCCATTGGTC
CAGATAGCTG GCGGCGGCGG ACTGAAAGAC GGCAAAAAGT ACGAATATAC CGACGAGACG
CCAGGCAAGT GGGGCAACAG GTATTACCGC CTCAAAATGG TCGATATTGA TAGCACCTAT
CAGTATTCCC GTGTACGTAC GGTCGCTTTC GATGCGCAAT CGCAATGGGC TGTTTATCCT
AACCCGTCGA AGGGAGTTTT CTACCTGGGC AATGAAGTGC CGTCGGGGCA AGCGACTTCG
GTGAACGTTT ACGACTTGTA CGGCAGGATA CTCAAACAGG TAAAAGGCGA GTCGCTGAAT
GCGGAGGCGA AGCGGAAAAT TGATATTTCA GGGCAGGAAT TCGGTGAAGG AATTTATGTA
TTGGAAGTGG TAAATGGCGA AACAAAACAG GCATTTCAGG TGTTGAAAAA CTGA
|
|---|
| Protein sequence | MKWKNLYYTL LLTSSLIGNA TAQQRKDYEI LLRSGSFVPQ QNVASAGSRT SAAFRLANDG
QKSFVIIQFD DIPTEDERRE LKREGIELLE YLPNYAYTAT IGAGSNPGAL ARTRGRAIIE
LNAEQKMEPS LANGRIPSHA FVSPTTVDLW ISYPRSFSYE EIKAALQARG VEIVADDFKK
YQVLTVRIPA KELKSLASQP FIQYVQALPQ PDRQLNSKST VNGRANVLKS ALPGNRNLSG
AGVVVGIGDE SNPLRHIDFN TRIINRAPID GGSHGLHVMG TMAGAGIMEE RNAGYAPKAT
VVAQSYSSIL AYSPQYVQDF GMVITNNSYG SDVVTCETNG VYDLYSYILD QQAFDMPYLQ
HVFAAGNSGK ITCAPFAAGF ATVLGGYQTA KNVITVGATN ETSAIYSESS RGPVKDGRVK
PEITAQGSVI VSTVPTNLYT NGSGTSMSSP AVSGGLALLY ERYRQLNGNQ NPKNGLMKAL
LVNGAVDRGN EGPDYRFGFG WLNLLRSVKM LESQSYKTDQ VSHQGINNFA IDVPAGTAQL
KVMLYWNDPA GSMLVSKNLV HNLDLQVINP SSNAVNPRIL NPAAAQVNAV AGTGVDNVNN
MEQVVINNPA QGSYTISVKG STIGQSPSQE YFVVYDIIPN SITLTNPVGG ERMKDGDATL
ISWDAFGNSN STFTVQYSVN DGQNWTNIST SVAAGTSQLN WVVPAGTKSE KVRVRVTQNS
TGAQSVSEPF TVIGVPGVTL SSLQCEGYIS VDWTAVSGAT DYEVMVLKGS EMVPVATTTG
VNYTFSGLSK DSTHYVSVRA RINGKPGRRA LAISRKPDTG TCAGSISDND LKVESILTPA
SSGRKNTSSA LTSAVFVKIR IKNLDDVDFN GPLDVGYLLN GMAVPVETIN PFIEKGKTYD
HTFAVGANLA DVGNYTFKVY IHGNQDLVAA NDTITKTFRQ LPNDPIALPY EDNMENLPVQ
SVTLTQMGLT GDGRYDFSAS SNDAGRIRTF VNSGFAASGQ KALTLDTNRP FPVGNTTYLT
ATYNLGEYDI NTHDLRLVFS YKNHGQKSND NNRVWIRGKD SDTWIELYNL FANQNLSTEG
YKTTVPLEMS GLLAANAKNF SSSFQVRWGQ WGKMLTSDYS NGAGYSFDDI RIISVTDDIQ
MISLLAPPTE SCGLGNAESI AVRIRNSSAR DISDIPLVLS LPDGTVILDT IPLIAKRSTI
DFTFNQKADL SEIGALDIKA WAALPTDSFR DNDTLSVKVF NAPVLSTFPY LEDFENGDGF
WSAKGTNSSW QYGTPVSSVV NKAASGTKIW KTNLSGGHND KEESYLYSPC FNVSSLTSPT
LSFSAAIDLE VCEPTPCDYV YVEYSGNNGP WTRLGAVGQG TNWYNKTYSG KGAWALQNYV
RWHVASMALP TGFTNLKIRF VLISDGFTHR EGIALDDIHI FDNVSPIHDS SNGVATQQVS
GSGWVNFVQN GKMLASINAN GQSMGNTEVR SYVNTTGVRN GNGHYYLDRN FTIKPANANL
ANFATVRFYF LETESEALIN AVGCASCGKP ANAFELGISQ YSNPINTSKE DGSLINSTEG
GWTYHPAEEV KLVPYDKGYY LEMSMKTFSE FWIAKGFVGN PGALPVELVN FNARKKQDAE
QSKDVIVEWE TASEENFDHF AIEVAAGDDA YRQGRFVPLV QIAGGGGLKD GKKYEYTDET
PGKWGNRYYR LKMVDIDSTY QYSRVRTVAF DAQSQWAVYP NPSKGVFYLG NEVPSGQATS
VNVYDLYGRI LKQVKGESLN AEAKRKIDIS GQEFGEGIYV LEVVNGETKQ AFQVLKN
|
|---|
| |