Gene Dfer_4308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4308 
Symbol 
ID8227911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5221690 
End bp5222244 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content44% 
IMG OID644932155 
Productprotein of unknown function DUF820 
Protein accessionYP_003088675 
Protein GI255038054 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.254676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTG TGGCTGAAAA ACTCTATTCG CTGGAAGAAT ACTTCGCCTT TTGTGAAACG 
CACGAAGGCC GGTTCGAATT CGTCAACGGG GAAATCATAG AGATGCCAGG AGAAACAACT
ACTTCCAATC GTATTGCTAG CAATGTCCAC TTCCACCTGC GAGGGATTTT GGAGGGACGC
CCTTACGAGC TTTACCAAAA TTCCGTGAAA TTGAAAGTCG AGGACGGAAG AGTGGTCCGT
ATCCCGGATT TTATGGTCTG TGAGGAAAAG GGCGATGCCA TTAAATACAC TACTTTCCCG
ATCCTGATAG TGGAAGTATT ATCTGAAAGT ACAGCCAAAA CCGATCGCAT TGATAAGCTT
CGTGAATATT CCCACGAGCC ATCGCTCATC TATTACCTGA TGATCGAACA AGCCAAATGT
GGCATCGAAA TGTACACCCG TGATGGAGAC CACTTGTGTT TTGAGTTTTA TGATAAAATG
GAGGATGTGA TCAAACTGCC GTATTTCAAT GCTGAACTGC CGGTGAGTGC TATTTATAAA
AAGATTGTTT TTTAG
 
Protein sequence
MEAVAEKLYS LEEYFAFCET HEGRFEFVNG EIIEMPGETT TSNRIASNVH FHLRGILEGR 
PYELYQNSVK LKVEDGRVVR IPDFMVCEEK GDAIKYTTFP ILIVEVLSES TAKTDRIDKL
REYSHEPSLI YYLMIEQAKC GIEMYTRDGD HLCFEFYDKM EDVIKLPYFN AELPVSAIYK
KIVF