Gene Dfer_4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4300 
Symbol 
ID8227903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5213946 
End bp5214374 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content48% 
IMG OID644932147 
Productprotein of unknown function DUF306, MetA and HslJ 
Protein accessionYP_003088667 
Protein GI255038046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.364521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.725536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCC TTCTCATTCC GACAGCATAC GTGCTGTTTT TTTCACTGTT GATTGGTTGT 
GGAAAAACTA CCACAATCAG CAGTAACATG GAGTTGACCG GCAAATGGCA ATTGGACAGC
ATTGTGCAGG AGGATGTAAT CATCAAAAAA CCAGCCACCA CAAAAGGCGT GATGGACATA
GGCCTCAACT TTAAAGAAAA AGGCGAGCTG GAAGGGACTA CTTCCACCAA TATCCTCACA
GGATTTTACG AAACCGCTCA GCAGAATACG ATCCAGCTCG GCGGTGGCGG CACCGAACGC
GCAGAAACAT CCTGGGGCAA CCTGTTTGTG AATGCGTTGC CGAATGTAAA CCTGTACGAT
TTGAAAGCGA ACAAGCTGAT CCTGTATTAC GACAATGGCA ACCAGCTCAT TTTCAGCCGG
GTGCAGTAA
 
Protein sequence
MKGLLIPTAY VLFFSLLIGC GKTTTISSNM ELTGKWQLDS IVQEDVIIKK PATTKGVMDI 
GLNFKEKGEL EGTTSTNILT GFYETAQQNT IQLGGGGTER AETSWGNLFV NALPNVNLYD
LKANKLILYY DNGNQLIFSR VQ