Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4286 |
Symbol | |
ID | 8227889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5193559 |
End bp | 5195451 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644932133 |
Product | RagB/SusD domain protein |
Protein accession | YP_003088653 |
Protein GI | 255038032 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAATCA TGAAAAAAAT ATCCATTAAT ATATTCGTTT CCGCCTCGCT GCTGTTCCTG TCGGGCTGCA ACGACTGGCT CGAACGCAAG CCGCAGAATA TCATCCTCGA AGAGCAGGTA TGGAACGACC CGAAGATGAT CACCGGCCTG CTCGCCAACT ACTACGACCG CCTGCCCTAC CACACCGACC TCAGCCACGG CTCGAACGGC GATATAAACG CGATCAATCG CGAAGGCTGG CAGGACTTTG CCGCATACGA CGAAGCGATG TGGTCCAATA ACGACGATGC GCGTAACAAC CTCATCAACT ATGCCTTCGA CCGCTGGCGG CTGTGGGATT ACGGCCTCAT CCGCGACATC AACCTGGCCC TGGAAAACAT CCAGACCTAC GCGGTGAAGC TCACAGAAGC CCAAAAGACC CAGTTTTCTG CCGAACTACG CTTCCTGCGT GCCTATGTGT ATTTCGAGCA CGTAAAGCGC ATGGGCGGCG TTCCGCTGGT GACGAAGCAA TTGATCTACA ACTTCGACGG CAACCCCGGC GCATTGCAGC AGCCGCGCAA CAAGGAGGAG GAAGTGTACG ACTTCATCGC CTCGGAGCTC GATGCCGTGA AAGACCAGCT TGGAAACGGA ACGAGCAACA CGCGCGCCAA CAAGTTCACT GCATTGGCCG TGAAAAGCCG CGCCATGCTG TATGCCGCTT CCATTGCCAA ATACAACGGC CGCATGGCGT CGCCAATCTC CACGCCCGGC GGCGAAGTGG GCATTCCTGC TTCCAGGGCT AATGATTATT ATACCAAATC GCTGGAAGCA TCGGAGGAGA TCATCAGCAG CGGCAGCTAC GAGCTGTACA AGACGAACCC CGACAAGGGC GTGAATTTTT ATGAAGCCGT TACCAAGAAA AGCGCCAACC GCGAGGTGAT ATGGGCACAG GACTTCCTCG TAAGCAAGGA TAAGCGCCAC GGATTTACCT ACGACAACAT CGCGCGCAAT GTGCGGGAAG ACAATCTGTC GTCATCGTCC ATTACGCCTA CTTTGAACCT CGTGGAGGAT TACGAATACC TCGACGGCAC CTCGGGCGAG CTCAAAAACC GCAATGCCGG CAATACGGAC TACGTTTATT ACGACAAGTT GCAGGATATT TTTGCCAACA AGGATGCCCG CCTCTACGGA ACGATCATCT TCCCCGGCAC CACCTTCCGC GGCTCAGAAG TGCAGATCCA GGCGGGTGTG AAAGTGTGGG ATAATGCTAC CAATGCATTC AGAACGGTGG AATCCAATGT GCTCGGCTCG GTGTATGACG ATGGGGGCCT GCTTACCGGC TCGTCGGGCC CGCAGCGCTC GCAAACGGAG GTTTCGAACA CCGGTTTCTA CCTGCGCAAA TATGTGGACC AAACCGCCAT GTCGAGCACA CGCGGTATCC GCAGCGACAT GTGGTGGGTG CGCTTCCGGC TGGGTGAAAT TTACCTGAAT GCCGCCGAAG CCGCTTTCGA ATTGGGCCAG AATGCCAATG CATTGAAATA TGCCAACACC CTGCGCGAAC GCGCCGGCTT CCCTGCGAAC AGCCTGAAAA CGCTTACGCT GGAAAAACTG CAAAACGAGC GCCGCGTGGA ACTGGCATTT GAAGACCACC GCGTGTGGGA TCTCAAAAGA TGGCGCATTG CGCACGAGGT TTGGAACGGC AACGCGTCCA ATCCGGATGC GGTGATGTAC GCGTTGTATC CGTACCGCGT GGTGCGCCCG GGCCATGCCA CGCACGGAAA ATATGTGTTC GATAAGCTGG TAGCGCCCCG TTTCCGCACG CCGCGGTTCT TCCAGATGGG CAATTACTAC TCGGCCATCC AGCAGAGCGT GATCGACAAT AACCCGAAAA TTATCCGCAA CCCATTCCAT TAA
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Protein sequence | MLIMKKISIN IFVSASLLFL SGCNDWLERK PQNIILEEQV WNDPKMITGL LANYYDRLPY HTDLSHGSNG DINAINREGW QDFAAYDEAM WSNNDDARNN LINYAFDRWR LWDYGLIRDI NLALENIQTY AVKLTEAQKT QFSAELRFLR AYVYFEHVKR MGGVPLVTKQ LIYNFDGNPG ALQQPRNKEE EVYDFIASEL DAVKDQLGNG TSNTRANKFT ALAVKSRAML YAASIAKYNG RMASPISTPG GEVGIPASRA NDYYTKSLEA SEEIISSGSY ELYKTNPDKG VNFYEAVTKK SANREVIWAQ DFLVSKDKRH GFTYDNIARN VREDNLSSSS ITPTLNLVED YEYLDGTSGE LKNRNAGNTD YVYYDKLQDI FANKDARLYG TIIFPGTTFR GSEVQIQAGV KVWDNATNAF RTVESNVLGS VYDDGGLLTG SSGPQRSQTE VSNTGFYLRK YVDQTAMSST RGIRSDMWWV RFRLGEIYLN AAEAAFELGQ NANALKYANT LRERAGFPAN SLKTLTLEKL QNERRVELAF EDHRVWDLKR WRIAHEVWNG NASNPDAVMY ALYPYRVVRP GHATHGKYVF DKLVAPRFRT PRFFQMGNYY SAIQQSVIDN NPKIIRNPFH
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