Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4274 |
Symbol | |
ID | 8227877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5178695 |
End bp | 5179951 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932121 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003088641 |
Protein GI | 255038020 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAA AAGGCACCTC CGTCATCATT GGTGGCGGGA TTTCGGGTCT GGCTTCGGCC TATTATTTGC TTAAAAGCGG GTGGAAAGTG ACGTTGCTCG ACAAGGGCGA CCTGTTCGAT AACTGCTCCA TCGGCAATGC GGGTATGATC GTGCCGAGCC ATTTTATTCC GCTTGCCGCG CCGGGTATGG TTTCGAAGGG GATTAAATGG ATGTTCAACA GCCGCAGTCC TTTTTATGTA AAACCTTCCC TCGATTTCTC GCTCATTTCA TGGGGTTTGA AATTCATGAA AGCGGCCACG GAAGCCAATG TGGAACGCGC CGCGCCGCAT TTACGGGATT ATCATTTATT AAGTAAAAAA CTCTACGAAG ACCTCGTCCG AGACGAAAAC CTGGACTACG GGCTGGAAGA AAAGGGCATT CTAATGCTCT ACAAATCCGA TAAAACAGGC GAAGAGGAAA TTCACGTAGG CAAGCAGGGC CAGCAACTCG GCCTGGATAT CGATATGCTC AGCCGCGAGC AGGTGCAGGC CTTGGAACCG GGCATTCAAC TGGACGTTGC CGGCGCCGTG CATTACCGCT GCGACGCGCA TTTGTACCCG ACGGCATTAG TAAAAGGTTT GATCCAAAGC ATTACACAGC TCGGCGCCGA AATTGTCACA AACACCGAGG TGACCGGTTT TGACATTCAA AACGGGGAGA TCAAACGGGT GAAAACCGTC GCCAAAACCT ACGAAGGCGA TCTGGTGGTG ATGACCGGCG GCTCGTGGCT GCCGCAATTG GCAAAACAGG CCGGGTTGTC CATTCCGGTC ATGCCGGGCA AGGGTTATTC CTTCATGGAA CCGAACTCGC AGCATCCCAT TGTTCATCCC GCTTTGCTTC TTGAAGCGCG TGTGGCCGTG ACGCCCATGA ACGGACAGGT ACGCTTCGGC GGCACGATGG AACTCGCGCC GCTCAACAAC CAGATCAATA TGAACCGCGT GGAAGGCATT GTGAACTCCA TCCCGAAATA TTACCCCGAA CTAAACGTGG CCGTACCGCA AAAAGACCGC ATCTGGTACG GTTTCCGTCC TTGCTCGCCG GATGGCTTGC CGTATTTGGG CTATTCCAAA AAGCTCAGCA ACCTGATCGT CGCCGGCGGT CACGGGATGA TGGGCATCAG CCTCGGGCCT GGAACGGGTA AAATAGTTGC GGAACTGGCC GAGCGTGCGA GACCTTCGGT TAACATAGGT CTGTACGATC CTGAACGGTA CCAGTAA
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Protein sequence | MSKKGTSVII GGGISGLASA YYLLKSGWKV TLLDKGDLFD NCSIGNAGMI VPSHFIPLAA PGMVSKGIKW MFNSRSPFYV KPSLDFSLIS WGLKFMKAAT EANVERAAPH LRDYHLLSKK LYEDLVRDEN LDYGLEEKGI LMLYKSDKTG EEEIHVGKQG QQLGLDIDML SREQVQALEP GIQLDVAGAV HYRCDAHLYP TALVKGLIQS ITQLGAEIVT NTEVTGFDIQ NGEIKRVKTV AKTYEGDLVV MTGGSWLPQL AKQAGLSIPV MPGKGYSFME PNSQHPIVHP ALLLEARVAV TPMNGQVRFG GTMELAPLNN QINMNRVEGI VNSIPKYYPE LNVAVPQKDR IWYGFRPCSP DGLPYLGYSK KLSNLIVAGG HGMMGISLGP GTGKIVAELA ERARPSVNIG LYDPERYQ
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