| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4271 |
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| Symbol | |
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| ID | 8227874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5174604 |
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| End bp | 5175536 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644932118 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_003088638 |
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| Protein GI | 255038017 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.443076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAAG AAGCATGGTC TGGCATTTTC CCAGCGTTGG TGACGCCATT CAAATCAGAT
GATACAATTG ATTTTGAACT GTTCGGCAAG AACCTCGACG CGCAGGTTGA GGCAGGTATT
ACCGGGGTAA TCGTAGGCGG TTCGCTCGGG GAAGCCAGCA CGCTCACCCG CGCCGAGAAA
ATGGAGCTGG TGAAATATGC GAAACAGGCA CTTCCTGCTG GTTTGCCGGT AGTATTAGGC
ATCGCCGAGC AATCGACCGC CGAAGCGGTG AGCATTGCGA AAGAAGCGGA AAGCGCAGGC
GCGGACGGTC TGATGATCCT CCCTCCGATG CGTTACAAAG CCGATGATGC CGAAACCGTA
CATTGGTTCA AAACGATCGC GCAGAGCGTT TCGCTGTCGA TCATGATTTA TAACAACCCT
TACGATTACA AAATCGAGGT GACGCTGCCC ATGTTTGAGG AACTTGCCAA GATCCCGAAC
ATCCACGCCA TCAAGGAATC CACGCGCGAC GTGAGCAACG TTACGCGCCT GTTCAACCGC
TTCGGTGACC GTTTCCGGGT GTTCTGCGGT GTGGATACAT TGATTATGGA AGAGGTAATG
CTCGGCGCCG ACGGCGTGAT CGGCGGCCTC GTGGATGCAT TCCCGAAAGA AACGGTAGCG
ATCTTCAACC TCGTGAAGGC GGGCCAATAC AAGGAAGCGC TGGCGATTTA CCGCTGGTAC
CTGCCATTGC TCGAACTGGA CATTCATCCT AAATTGGTTC AAAATATCAA ACTCGCCGCT
GCCAAAATGG GCATTGGTTC GGAATACGTG CGCGAGCCGC GCCTGCCGCT GCAAGGCGCA
GAACGCGAGC GCGTGATCGC GATCATCGAC CAGGCCATCG CTACGCAGCC TGAATTGCCG
GATTATCTGA ATCTGGCGGT TGACGTGGCG TAA
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| Protein sequence | MNKEAWSGIF PALVTPFKSD DTIDFELFGK NLDAQVEAGI TGVIVGGSLG EASTLTRAEK
MELVKYAKQA LPAGLPVVLG IAEQSTAEAV SIAKEAESAG ADGLMILPPM RYKADDAETV
HWFKTIAQSV SLSIMIYNNP YDYKIEVTLP MFEELAKIPN IHAIKESTRD VSNVTRLFNR
FGDRFRVFCG VDTLIMEEVM LGADGVIGGL VDAFPKETVA IFNLVKAGQY KEALAIYRWY
LPLLELDIHP KLVQNIKLAA AKMGIGSEYV REPRLPLQGA ERERVIAIID QAIATQPELP
DYLNLAVDVA
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