| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4268 |
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| Symbol | |
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| ID | 8227871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5168223 |
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| End bp | 5169734 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932115 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003088635 |
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| Protein GI | 255038014 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.246385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.146292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC ATATTCTTTA TACTTGTCTG ATATTGGGAA TGTCCGCCTG CAACGACTTC
CTGACCGAAA ATCCCACCGG CCAGCTTACG ACCGGCTCGT CCGTATCCAG TCCGGAAATC
GCCCGCGCAT TCGTGGATGG CTCCTATTCG CAGATTACGA CCTTCAATAA CGGCGGCGGC
GGCTGGGGCG GCAACAATGC TTCGCTGGTG GAGTTCATGA CCGGAAAGGC CGACGGCAAC
TCGCAAACCG AGGCATTCAA ATTCTTCAAC CTCGAATACG ACGCGCGCGC ATTTTATGTC
GACGGCTGGT GGTCGGGGAT GTACTCGGGC ATTGCGCGGG CTAACCTGGC GATCCAGAAG
ATCGGCGAAA TCAGCACATT GCCGGCTGCT ACCAAAACCA ACATGATCGC AGAGGCGCGG
GCCATGCGTG CATTGTATTA CTTCCAGCTG GTGCGCATGT TTGGCGATGT TCCGAAAATC
ACCACGCTCA TCACCTCGCT CGACGATGTG CAAACGCCCC GCTCTCCGGT GAAGGAAATC
TACGACGAGA TCATCATCCC CGACCTGCTG GAAGCCGAGA AATCGACCTT GCCGTGGCGC
GACACTGCCG GACGGATGTC GATGGGCGCG ATTAAAGCCC TCCTCGCGCA CGTGTACCTG
ACCTACGCGG GCTTTCCCGT GAGCGCAGGC GTGCCCGCGT ACACCGAGTC GGCGAAGCGC
TCGAAGGAGA TCATCGACAA TGGCACCTAT TCGCTTTTTG CGGAATACAC CGACATGATC
GTGCCTGCAA ACCGCAACCA GACCGAGTTT ATTTTCCAGG TCCAGCATGA AAAGGACATT
CGTAACAATG GCCTTACACC GGTAACCCTG CCTGCATTCA CCGGCATTGC GTCCTATTCC
GATGAATACG GCGGCCTGCT GCCCCGGAAA GAGTTCGTGG AAAGCTTCGA AAAGGGCGAC
AAGCGTGCGA AAGAGAAGCA ATTCTTTTAC ACTTATTACA AAGGTCACCC GAGCGACTAC
CCCGCCGGCG ACCCGCGGCG CGACAGCCTG AACCTGGGCG GCTACTATAT TTACAAGTGG
TTTGATAAAC AAGCCATTGA CAACGACGCC AAGGCGAACA TCAACTATAC GATATACCGT
TACGCGGAAA TACTGCTGAT GTACGCCGAA GCATCCAACC GCGTGGAAGG CAAACCGAAT
GCGCAGGCGC AAAAGGCATT GAACGACGTT CGCAAACGCG CCCAGTTACC GGCTGTGACC
ACTACGAATG TGGATGAATT TGAAAAGGCT GTGTGGGCGG AGCGCTACTT CGAGCTTTGC
TATGAAGGCA AGATGTGGTT CGATATGATC CGCACGCGTA AGGTCCGCAA CGACCTCACG
AAACAATGGG ATAATTTTGT AGGTCACAAG ACGGTTTACG GCAAAACATT CGCCGAAAAA
AACCTGCTTT TGCCCATCCC GCAGCGCGAA ACGGACAATA ACAAATCGTT GGAACAGAAT
GTAGGATTTT AG
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| Protein sequence | MKKHILYTCL ILGMSACNDF LTENPTGQLT TGSSVSSPEI ARAFVDGSYS QITTFNNGGG
GWGGNNASLV EFMTGKADGN SQTEAFKFFN LEYDARAFYV DGWWSGMYSG IARANLAIQK
IGEISTLPAA TKTNMIAEAR AMRALYYFQL VRMFGDVPKI TTLITSLDDV QTPRSPVKEI
YDEIIIPDLL EAEKSTLPWR DTAGRMSMGA IKALLAHVYL TYAGFPVSAG VPAYTESAKR
SKEIIDNGTY SLFAEYTDMI VPANRNQTEF IFQVQHEKDI RNNGLTPVTL PAFTGIASYS
DEYGGLLPRK EFVESFEKGD KRAKEKQFFY TYYKGHPSDY PAGDPRRDSL NLGGYYIYKW
FDKQAIDNDA KANINYTIYR YAEILLMYAE ASNRVEGKPN AQAQKALNDV RKRAQLPAVT
TTNVDEFEKA VWAERYFELC YEGKMWFDMI RTRKVRNDLT KQWDNFVGHK TVYGKTFAEK
NLLLPIPQRE TDNNKSLEQN VGF
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