| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4250 |
|---|
| Symbol | |
|---|
| ID | 8227853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5145057 |
|---|
| End bp | 5145920 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644932097 |
|---|
| Product | protein of unknown function DUF1080 |
|---|
| Protein accession | YP_003088617 |
|---|
| Protein GI | 255037996 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAC AACTCACGAT CCTGTTCAGC CTGATGTGCC TGATGGTTTT CGGTCAAAAG
AATAATGCCG ACAAGCAGGA ATGGAAGCAG CTTTTCAACG GAAAAAACCT GGATGGCTGG
GATATTAAAA TCCGCGGCTA CGAACTGAAC GACAATTACA ATAACACATT CCGGGTGGAA
GACGGCAAAA TGCTGGTTCG GTATGACAAA TACGACGATT TCGCGCAGAA ATACGGCCAT
ATTTTCTACA AAGGTGATTT TTCCTACTAC CGTGTGGCGG TAGAGTACCG GTTTGTAGGC
GAGCAGGCGC CGAAGGGCGA AGGCTGGGCG TGGCGTAACT CGGGCGTGAT GGTGCATGGG
CAGCCAGCCG CGACGATGGG CAAAGATCAG GATTTCCCCG CGTCGATCGA AGTGCAGCTT
TTGGGAGGCA ACGACAAAAC CCGCACGACC TGCAACTTGT GTACACCCGG TACCAATGTG
GTGATCGATG GTAAACTGGT TACGCAGCAT TGTGTCAACT CCAAATCAAA AACCTATAAC
GGCGACCAGT GGGTACGCGC CGAAGTGCTG GTACTGGGCG ATTCGCTGAT CCAGCATTTT
GCCAATGGCG AAATGGTGCT GGAATACAAC AAGCCGCAGC TCGGCGGCGG TAATTTGGGC
GGCGCCACCG ATCCGGAAGT AAAAATCGCC GGCAAGTTGC TCGATCACGG TTCCATTTCA
CTCCAAAGCG AAAGCCATCC CGTCGAGTTC CGCAAAGTAG AAATACTGGA TTTGAAGGGA
TGTATGGACC CGAAAGCGAC GAATTACAAG TCTTACTATG TGAAGGCGGA TAATGGGAAG
TGCACTTATG GGCGGAAAAA ATGA
|
|---|
| Protein sequence | MKLQLTILFS LMCLMVFGQK NNADKQEWKQ LFNGKNLDGW DIKIRGYELN DNYNNTFRVE
DGKMLVRYDK YDDFAQKYGH IFYKGDFSYY RVAVEYRFVG EQAPKGEGWA WRNSGVMVHG
QPAATMGKDQ DFPASIEVQL LGGNDKTRTT CNLCTPGTNV VIDGKLVTQH CVNSKSKTYN
GDQWVRAEVL VLGDSLIQHF ANGEMVLEYN KPQLGGGNLG GATDPEVKIA GKLLDHGSIS
LQSESHPVEF RKVEILDLKG CMDPKATNYK SYYVKADNGK CTYGRKK
|
|---|
| |