| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4249 |
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| Symbol | |
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| ID | 8227852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5143547 |
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| End bp | 5144875 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932096 |
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| Product | Deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_003088616 |
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| Protein GI | 255037995 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.846588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCTGA AAACAAAAGA CAAAATTGCG ATATTCTGGT TTCGCCGGGA CCTCAGGCTG
CACGACAATG CGGGGCTCTA TTACGCATTG CGCTCCGGCT ACCCGGTCGT TCCGCTCTTC
ATTTTCGACC GGAACATTCT CGACGACCTC GAAGAAAAGA CAGACGCGCG ACTGACGTTC
ATTCACAAGG CCGTTTCGGA AATCCGGCAG GCATTGCGGC AAAAGGAAGC CGATATCATG
GTCGAATACG GATTTCCTGA AAAAATCTGG GAGAATTTGG TGGCCGGACA TGACATCGCC
GAGGTTTATA CCAACACCGA CTATGAGCCT TACGCTACCG ACCGCGACAA AGCTATTTAC
CGGATATTGA AGCAGAAGGA TATCGTTTTC AAAACCTGCA AGGACCAGGT CATTTTTGAA
AAACAGGAAA TACTCAGCGG CCAGGGCTCG CCCTACACCG TTTTTACGCC ATATAGCCGC
GCCTGGAAGC AGAAACTCAA CGATTTTTAC CTCAAATCCT ACCCTACTAA AAAGTATTTC
AGGCATTTTC ACCAATGGCA CGGCAGCGCA TTGCCCTCAT TGCGGGAAAT GGGTTTTGAA
AAAACCGACT ACGACTTTCC GCCCGCCGAT GTAGATGATA CGTTGCTAAA AAACTACGCA
AAAGAGCGCG ATTTCCCTGC TATGGAAGCA ACAAGCCGGA TCGGCGTTCA CCTCCGCTTC
GGCACCGTGA GTATACGCGA CCTCGCGCGG CAAGCACGCG CGCACAGCGA CACGTTCCTG
AACGAGCTGA TCTGGCGCGA TTTCTACCAG CAAATCCTTT CCAACTTCCC GCACGTGGGC
AAAGGTGACG CATTTCGGAA GGCCTATGAT TTGATCAAAT GGCGTTACGA CAAGGCCGAT
TTTAAGAAGT GGTGCGAAGG AAAAACGGGT TATCCGCTGG TGGATGCCGG AATGCGGCAA
CTGAATGCGA TCGGGTTCAT GCATAACCGT GTGCGAATGG TCACGGCGAG TTTCCTTTCC
AAGCATTTGC TGATCGACTG GCGCCTAGGG GAAGCCTATT TCGCTCAAAA ACTGCTGGAT
TACGATCTTG CAGCCAACAA TGGCGGCTGG CAATGGGCGG CAGGATCAGG AACCGACGCA
GCGCCGTACT TCCGGATATT CAACCCTGCG TCGCAGGCGG AGAAGTTCGA TCCGAAAATG
GAGTATATCA AAAAATGGGT CCCCGAGTTT GGTACCGACG AATATCCTGA GCCGATGGTC
GATCACAAAG AGGCACGCGA ACGTTGCCTC CAAGCCTACA AAACGGCGCT CGATAAAGCG
AATCAGTAG
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| Protein sequence | MGLKTKDKIA IFWFRRDLRL HDNAGLYYAL RSGYPVVPLF IFDRNILDDL EEKTDARLTF
IHKAVSEIRQ ALRQKEADIM VEYGFPEKIW ENLVAGHDIA EVYTNTDYEP YATDRDKAIY
RILKQKDIVF KTCKDQVIFE KQEILSGQGS PYTVFTPYSR AWKQKLNDFY LKSYPTKKYF
RHFHQWHGSA LPSLREMGFE KTDYDFPPAD VDDTLLKNYA KERDFPAMEA TSRIGVHLRF
GTVSIRDLAR QARAHSDTFL NELIWRDFYQ QILSNFPHVG KGDAFRKAYD LIKWRYDKAD
FKKWCEGKTG YPLVDAGMRQ LNAIGFMHNR VRMVTASFLS KHLLIDWRLG EAYFAQKLLD
YDLAANNGGW QWAAGSGTDA APYFRIFNPA SQAEKFDPKM EYIKKWVPEF GTDEYPEPMV
DHKEARERCL QAYKTALDKA NQ
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