| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4238 |
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| Symbol | |
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| ID | 8227841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5132310 |
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| End bp | 5133032 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644932085 |
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| Product | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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| Protein accession | YP_003088605 |
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| Protein GI | 255037984 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.996158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAAA TTATCCCGGC TATCGACCTC ATTGAAGGCA AATGCGTGCG CCTCACCCAG
GGCGATTATG GTCAGAAGAA GATTTACAAC GAAAACCCGC TGGAAGTAGC GCTGCAATTC
GAAGACGCCG GGCTGAAAAG GCTGCATTTG GTGGACCTCG ACGGTGCAAA GGCCAAAAAA
GTCGTTAACT GGAAGGTGTT GGAAAAAATT GCTTCCAAAA CTTCGCTTCA CGTGGATTTC
GGCGGCGGCG TGCAATCGGA TGACGACCTG AAAATCACAT TCGGAAGCGG CGCGAAGCAG
GTTACCGGCG GCAGCATTGC CGTGAAGCAG CCCGATTTGT TCGAGCATTG GCTTAAAACG
TACGGCGGCG ATAAGATCAT CCTCGGCGCG GATGCCAAAA ACGAGAAGAT CGCGGTGAGC
GGCTGGGAGG AAGGTACGAG CATCTGGGTG TATGATTTTG TGGAAGAATA TGTGGAAAAG
GGCGTTAAAT ACACCATCAG CACCGATGTA GCAAAGGACG GTCTACTCCA AGGCCCTTCT
TTTGATTTAT ATAAAAACCT CCAAGACAAA TGCCCCGACC TGAACATTAT CGCCAGCGGC
GGCATTGCGG GTATCGAGGA TGTGGAGAAA CTGGCAGAAA TGAATATCTA CGGCGTGATC
ATCGGTAAAG CGATTTACGA AAACCGGATC AGCCTGGCCG ATTTACAGCG TTTTTCAGTT
TAA
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| Protein sequence | MIQIIPAIDL IEGKCVRLTQ GDYGQKKIYN ENPLEVALQF EDAGLKRLHL VDLDGAKAKK
VVNWKVLEKI ASKTSLHVDF GGGVQSDDDL KITFGSGAKQ VTGGSIAVKQ PDLFEHWLKT
YGGDKIILGA DAKNEKIAVS GWEEGTSIWV YDFVEEYVEK GVKYTISTDV AKDGLLQGPS
FDLYKNLQDK CPDLNIIASG GIAGIEDVEK LAEMNIYGVI IGKAIYENRI SLADLQRFSV
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