Gene Dfer_4232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4232 
Symbol 
ID8227835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5125293 
End bp5126240 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content58% 
IMG OID644932080 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_003088600 
Protein GI255037979 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0256946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG TAATTCTAGA CGGATATACT TTAAACCCTG GCGATCAGGA CTGGGCGCCG 
ATTGAAAAAC TGGGCAATGT GACCATTTAT GACCGGTCGG CGGCCGGCGA AATTGTGGAG
CGGGCGGGTA ATGCGGATGT GTTGCTGGTC AATAAGGTGG TGCTATCCGC AGAAACTCTG
GCGCAGCTGC CGCAGGTTAA GTACATTGGC GTGATGGCGA CCGGTTTTAA CAATATCGAT
ATCGAGGCGG CCAGGAAGCA CGGGATTACG GTGACTAATG TGAAGGCTTA CGGGCCTGCG
TCGGTGGCGC AGCAGACATT TGCCTTCCTG CTGGCGATCG TTAACCGCGT GGAAACGCAC
AGCCAGAGTG TTTTAAGCGG AGAATGGGTG GCGTCGCCCG ATTTCTGTTA CTGGAAAACG
CCGCTTACCG AACTGGCAGG CAAAACGATG GGGCTCATCG GCCTCGGCGA TATCGGCTCG
CAAGTGGCGA AAATCGCGCT GGCGTTCGGC ATGAAGGTCA TAGCTTACCG CAAACACCCG
GCCCCGGCCG GCGGGATCGA AACGGTGTCG CTGGATGATA TTTTCACGCG GAGCGACGTC
ATTAGCCTCC ATTGCCCGCT TACCGACGAA ACGCGGGAGA TTATCAACCG GAACAGCATT
GCTCAGATGC AGCCCGGCGC CATTATCCTC AACACCGGCC GCGGACCGCT CATTCACGAA
GCCGACCTGG CCGAAGCCCT TCGCAGCGGC GCCATCGCCG CGGCGGGGCT GGACGTACTT
TCCGTGGAAC CGCCGAAAGC CGACAACCCG CTGCTCTCGG CCCCGAACTG CATCATCACG
CCGCATGTGG CCTGGGCCAC TTTCGAGGCG CGGAAACGGT TGCTCCAAAT GGTCGCCGAT
AATCTGGCAA GTTTTCAGAA TGGCGATCCG CGCAATGTGG TTTCGTAA
 
Protein sequence
MNIVILDGYT LNPGDQDWAP IEKLGNVTIY DRSAAGEIVE RAGNADVLLV NKVVLSAETL 
AQLPQVKYIG VMATGFNNID IEAARKHGIT VTNVKAYGPA SVAQQTFAFL LAIVNRVETH
SQSVLSGEWV ASPDFCYWKT PLTELAGKTM GLIGLGDIGS QVAKIALAFG MKVIAYRKHP
APAGGIETVS LDDIFTRSDV ISLHCPLTDE TREIINRNSI AQMQPGAIIL NTGRGPLIHE
ADLAEALRSG AIAAAGLDVL SVEPPKADNP LLSAPNCIIT PHVAWATFEA RKRLLQMVAD
NLASFQNGDP RNVVS