| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4222 |
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| Symbol | |
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| ID | 8227825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5105526 |
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| End bp | 5107073 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644932070 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003088590 |
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| Protein GI | 255037969 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.710701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTA AATCATATTG CGCAGCACTT TTAAGCTGCT CACTGCTACT TTCCTGCACC
GATCTCGATG AAAACCTCGG GAGTGCCCTG GAAGAAAGTA CGACAGGTAA CATCAATCCG
GCCGAGTTGC TGATCAGCGC CTACACCTCG CTGAACGGCC CTTACCAGCA CGATAACCGC
TGGTGCTTGC AGGAGCTTTC CACCGACGCG GCCATCGCGC CAACACGCGG CGGCGACTGG
GACGATAATG GTACCCACCG GGCCATTCAC CTGCATACCT GGAATGCCGA TAACTCTTAC
ATGAGCAACA CATTCGGCGG CCTGCTCACG GCCATTTACC AGTCGTCCAA CGTACTGCGC
TACTCGCCAT CGAAGCAACA GGCTGCCGAA GCGCGGTTCA TCCGGGCGCT GGCGATGCTG
GATGTGCTCG ATTTGTGGGG TGTGGTGCCA TTCCGCGAGA GCCTGGAAGA TTTCCGCGAG
CTTCCCAAAA CACTCCAGCC CCAGGAAGCC ATCGACTTCA TTATCTCTGA AATGAATGCG
GTGATGCCGG ACCTGCCCAC CTCGGGCGCT GCCTACGTGG CCAACCAGAA TGCGGCAAGG
GTGTTGCTGA TGAAGGTTTA TTTGAACAAA GGCGTATTTC TGGACCGTCA GAACCCGAAG
TTCGATGCGG CCGACATGAG CAAGGTCGTA GCGCTGGCGA ATGAGATCAC AGGTTACACC
ATTTCGGCCC CCGGTAAGTA TTTCGATAAT TTCGCGCCTG ATAACAATGT AAAATCGACT
GAAAACATCT TCACGCTTTA CAACGAAGAA GGCGTAAGAG GTGGCGGCGT GGACCGGGCC
TACTGGACGG TATCGCATTA CAACATGACG CCCGGCGGAT GGAACGGATG GGCAACGCTT
TCCAACTTCT ACGACAAGTT TACGGCTAAC GACGAGAGAA GAGGAATTTA CTACAACTAT
CCGTCCGACA CGACGTCCAA CCGCACCAAA AACTATAAGC GCCAAAACGT CGGTTTCCTC
GAAGGACAGC AGTACAGCTG GGTGACCAAC AAGCCATTGA ATGCCCGTAA CCCGGCCACT
CAGCCGCTGG TATTCAGCCG CGAACTCACC ATCAGAACCA GCGGAACCAC GCTGGAGACT
GCGGGTATCC GTGTAATCAA ATATCCGTTT GACTATGCTT CCAAAGGCCA GCGCAACAAC
GACTGGGTCG TTTACCGCTA TTCGGACGTA TTGTTGATGA AAGCAGAAGC GATCCTCCGC
GGCGGCACTC CGGGCACCGC AGCCGACGCC CTGACGATCG TAAACTCGAT CCGCACGAAC
AGAGGCGCGG CCAACCTGAC CGCTCTGACG CTGGACAACC TGCTGGACGA ACGCGGAAGA
GAATTGTACT GGGAAGGTTG GAGACGCCAG GATCTGATCC GATTCGGCAA ATTCATGCAG
GCAGGACAGA TCCGCCCGGC GGACGCCGAT CCTAAAACAT TGGTATACGC AATCCCGAGC
CAGCAAATTG CGGTCAACTC GAATCTCAAA CAGAACCCGG GTTATTAA
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| Protein sequence | MRLKSYCAAL LSCSLLLSCT DLDENLGSAL EESTTGNINP AELLISAYTS LNGPYQHDNR
WCLQELSTDA AIAPTRGGDW DDNGTHRAIH LHTWNADNSY MSNTFGGLLT AIYQSSNVLR
YSPSKQQAAE ARFIRALAML DVLDLWGVVP FRESLEDFRE LPKTLQPQEA IDFIISEMNA
VMPDLPTSGA AYVANQNAAR VLLMKVYLNK GVFLDRQNPK FDAADMSKVV ALANEITGYT
ISAPGKYFDN FAPDNNVKST ENIFTLYNEE GVRGGGVDRA YWTVSHYNMT PGGWNGWATL
SNFYDKFTAN DERRGIYYNY PSDTTSNRTK NYKRQNVGFL EGQQYSWVTN KPLNARNPAT
QPLVFSRELT IRTSGTTLET AGIRVIKYPF DYASKGQRNN DWVVYRYSDV LLMKAEAILR
GGTPGTAADA LTIVNSIRTN RGAANLTALT LDNLLDERGR ELYWEGWRRQ DLIRFGKFMQ
AGQIRPADAD PKTLVYAIPS QQIAVNSNLK QNPGY
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