Gene Dfer_4207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4207 
Symbol 
ID8227809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5089712 
End bp5090422 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content55% 
IMG OID644932054 
ProductABC transporter related 
Protein accessionYP_003088575 
Protein GI255037954 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR03522] gliding motility-associated ABC transporter ATP-binding subunit GldA 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG TCACCAACTT GACAAAGGTT TACGGAACGC AGCGCGCGGT CGATGGGATT 
TCATTTACGC TCAGGAAAGG CGAAATCGTG GGTTTTCTCG GGCCGAACGG TGCAGGGAAA
TCGACGACCA TGAAAATTCT TACCGGCTAC CTGAAACCGA CCGAAGGCCT GGCCAAAGTG
TCGGATTTCG ATGTGACGCA GCAACCGATG CCTGCTCGCA GGGCGATCGG CTACCTGCCC
GAGCATAACC CGCTGTATTT GGATATGTAC GTAACGGAGT TCCTGCTTTT CTCCGGAAAA
CTGTACGGAA TGGGCGGCGC GGCATTGCAG TCGCGGGTGG ACGAAGTGAT CGCGATGTGC
GGATTGGAAC CGGAGCGGCG CAAGAAGATC GGGCAACTGT CCAAAGGTTA CAGGCAGCGC
GTCGGGCTTG CGCAATCATT TTTGCACAAC CCCGAAGTAC TGATCCTCGA CGAGCCCACC
ACGGGCCTCG ACCCTAACCA GATCCAGGAG ATCCGTGAGG TGATCCGTAC CGCCGGCCAG
GACAAGACAG TGCTTTTTTC CACCCATATT ATGCAGGAAG TGGAGGCATT GTGCGACCGT
GTGATTATTA TCAACAAAGG CAAAGTAGTG AGCGACAGCT CGTTGCAGGA GCTGCGCCAA
ACGGGTGATT CGCTGGAAGA TATTTTCAAG AAGCTCACCC AGCAGGCTTA A
 
Protein sequence
MIEVTNLTKV YGTQRAVDGI SFTLRKGEIV GFLGPNGAGK STTMKILTGY LKPTEGLAKV 
SDFDVTQQPM PARRAIGYLP EHNPLYLDMY VTEFLLFSGK LYGMGGAALQ SRVDEVIAMC
GLEPERRKKI GQLSKGYRQR VGLAQSFLHN PEVLILDEPT TGLDPNQIQE IREVIRTAGQ
DKTVLFSTHI MQEVEALCDR VIIINKGKVV SDSSLQELRQ TGDSLEDIFK KLTQQA