| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4206 |
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| Symbol | |
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| ID | 8227808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5086472 |
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| End bp | 5089528 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932053 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003088574 |
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| Protein GI | 255037953 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT GGTTGTTCGG CCGGTTTCGT GTTGTAGTGA TTGTTGTGGC GCTGGTGGTG
CTGACCTCCG TGGCTTCCGT TGCGTGGAAA ATGATGTCGG TTAAGACCAC GGCCGTCAAC
AAACCCGCTG TTGCCGCACC CGAGCCCAAG CATAAGGCGC CCAAAAAGCG CCGTGACCCG
GTGTTGGTTC TTCCGGAAAA TGAATGGGTG GACAGTACGC TCAAATCCCT GAGCATCGAG
CAGAAGATCG GTCAGCTGTT CATGGTAGCT ACTTTTTCCA ACCGCGACGA ATCGCATTAC
CGTTACATCG ACAAGCTGAT TAACGATTAC CAGATCGGCG GACTGATATT CTTCCAGGGC
GGCCCCGTAA GCCAGGCGCA GCTCACCAAC CGCTATCAGG CGCATTCCAA CATTCCGCTT
TTCATCGGCA TCGACGGTGA ATGGGGCCTG GGCATGCGGC TCGACAGCAC GATTTCCTTC
CCGAAACAAA TGGTGCTCGG CGCGATCCAG GACGACCGGC TGATTTACCG CATGGGCGAC
GACATTGCGC GCCAATGCAA ACGCCTCGGC ATTCATATCA ACTTCGCGCC GGTGTCGGAT
GTGAACAGCA ACCCGGCCAA TCCGGTAATC GGTATACGTT CGTTTGGTGA GGACAAAGAG
AATGTCGCGC GGAAGTCGAT CGCCTACATG AAAGGCTTAC AGCACAATCG CATTATCGCT
ACTGCCAAGC ATTTCCCCGG CCATGGTGAT ACCGATGCCG ATTCGCATTT CACACTCCCG
GTGCTTAATC ATTCGCTGGA ACAGCTGAAT TCCGACTTGT ACCCTTACCG CGAAATGATC
GCCGACAGCC TGATGGGCGT CCTGAATGCG CATTTGTACA TTCCCGCATT GGACAACACG
CCCAACCAGG CCAGCTCGCT GTCTGATAAA GTGGTGAATG GCTTGCTCCG CAAAGACCTG
GGCTTCCGCG GCCTCGTGTT TACCGACGCC ATGAATATGC GCGGCGTGCT CAAAAACGGC
AAGCCGGCCG ACGTGAACCT GAAAGCGCTG GTAGCAGGCA ACGACGTGCT GCTTTACCCG
GAAAGCATCG CCGAAACCGT TTCGCGCATC AAGGATGCCA TCAATTCGAA GCTGATCAGT
GAAAAGATCA TCGACGACAA GGTGAAACGC ATTCTGCAAG CCAAATACTG GGCCGGGCTG
AACCAATATA AGCCGATAGA CATCAACAAT CTTTACAACG ACCTCAACAG CGAGAAGAGC
AAGGAACTGA ACCGCGAGCT CTCTGAGGCT TCCGTAACCG TTGTTAAAAA CGACAATAAC
CTGATCCCGA TCGGCTCGGT GATGGACAAC AACATAGCGT CCGTGAGCAT GGGCGAGGGC
AGCGGTGTGG CATTCCAAAA GATGCTCTCC ACCTACAAAC CGATGCGGAG CTACTCGTTT
TACGACGCGC CGTCGTCGCA GGACCAGATT ACCGAAATGC TCGGTTACCT GCAACCTTAC
AATACAGTGA TCGTCGACGT CCACGGCATT AGCTCCAAGC CCGGCCGGAA TTATGGCATT
ACCACGGGCA TGGTGGAGTT TGTTAACCAG CTCAAACAGC AGAATAAAAA AGTGATCCTC
TGCCTGTTCG GAACGCCTTA TAGCATTCAG TTTTTCCCTG ACACCGATGT GCTCATTTGC
GCCAACCAGG ACGGCAAAGA CCAGCAGGAG ATCGTGCCGC AGATCATTTT CGGCGCGCTG
GGCTCGAAGG GCCGCCTGCC GGTGTCGGTA CTGGCCCACA AAAGTGGCGG CGGTGTAAGC
ACCACGTCCA TCAATCGCAT TGCATTCGGC ACGCCGGAGA GTGTGGGAAT GGATGGTATT
TCTCTTAAAA AAATCGATGA AATCGCCACT GCGGCCGTGA ATGACCATGT TTTCCCCGGC
TGCGAAGTGC TGGTGGCCAG ACAGGGTAAG ATCATTTACG AAAAACAATT CGGTGGGTTA
AGCTATCGCA CCAACGAACG CGTAACGCCC GAGACGATCT ACGACCTGGC GTCGCTTACC
AAGGTTTCGG CTACATTGCA GGCTGTGATG CTCCTTTATG ACCGCAAGCA GATCAGTTTG
GATGAAAAGG CATCCAAATA CCTGCCTGAA CTGGCGGGTA CCAATAAGCA AAACTTCACC
GTCCGTGATT TGCTGCTGCA TCGTTCGGGA CTGGTTTCGT TCTACCCGTC GCTGTGGGAC
CGTACCAAAA CCAGCGCAGG CGGTCTTCTG CCGGAATATT ACAGTTCGAA ACAAGACACG
GCCTACTACC TGCAGGTAGC CCCGAAACTC TTCGCCAAAG GTGCATTGCG CGATTCGGTA
TGGAAGTGGG TGGTGGAATC GCCCATGAAC AACCGCCGCG ACCGCGCCGG CAGCTACGGT
TACCTGTACA GTGACCTCGG CTTTTTGACA CTCCAAAAAA TTGTCGAAAG AGTGGCCGGC
CAGTCGCTCG ACAATTTTGT GGCCGCCAAC ATTTACGAGC CGCTGGGGCT GCCCTACCTG
GGTTTCAACC CGCTGCGTCG TTTTCCTGAA AAGCAGATTG CGCCTACCGA GCAGGATTAC
CGGTTCCGCG GGCAGCTGCT ACAAGGAACA GTCCATGATC AGATGGCCGC CATTGTTGGC
GGCGTATCGG GCCACGCCGG CCTTTTTGGC ACCGCACGCG ACCTGGCGGT TTTACTTCAA
ATGAACCTCT GGAAGGGCAA CTACGCAGGA AAACGCTATT ATGAGCAAGC CACGGTGCCA
TTCTTCTCGC GGATGTACGA CGAATCCCAT CACCGCGGAC TGGGCTGGGA CAAGGCCCCT
GCGGACGGCA ACAGCTCATT CGTATCACCG CTGGCGTCCG TCAACTCATT CGGCCACACG
GGTTTCACCG GTACAATGGT GTGGGTAGAT CCCGAGGAAG ACCTGGTATT CATATTCCTT
TCCAACCGCG TGAACCCCGA CCCGGAGAAT ACGGCCATTA CGACCCATCG TACACGAAGA
AAAATCCAGG ATGTAGTGTA TGGTTCTTTG ATTCAACGGA AAAGCCAGCT TCCTTAA
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| Protein sequence | MKNWLFGRFR VVVIVVALVV LTSVASVAWK MMSVKTTAVN KPAVAAPEPK HKAPKKRRDP
VLVLPENEWV DSTLKSLSIE QKIGQLFMVA TFSNRDESHY RYIDKLINDY QIGGLIFFQG
GPVSQAQLTN RYQAHSNIPL FIGIDGEWGL GMRLDSTISF PKQMVLGAIQ DDRLIYRMGD
DIARQCKRLG IHINFAPVSD VNSNPANPVI GIRSFGEDKE NVARKSIAYM KGLQHNRIIA
TAKHFPGHGD TDADSHFTLP VLNHSLEQLN SDLYPYREMI ADSLMGVLNA HLYIPALDNT
PNQASSLSDK VVNGLLRKDL GFRGLVFTDA MNMRGVLKNG KPADVNLKAL VAGNDVLLYP
ESIAETVSRI KDAINSKLIS EKIIDDKVKR ILQAKYWAGL NQYKPIDINN LYNDLNSEKS
KELNRELSEA SVTVVKNDNN LIPIGSVMDN NIASVSMGEG SGVAFQKMLS TYKPMRSYSF
YDAPSSQDQI TEMLGYLQPY NTVIVDVHGI SSKPGRNYGI TTGMVEFVNQ LKQQNKKVIL
CLFGTPYSIQ FFPDTDVLIC ANQDGKDQQE IVPQIIFGAL GSKGRLPVSV LAHKSGGGVS
TTSINRIAFG TPESVGMDGI SLKKIDEIAT AAVNDHVFPG CEVLVARQGK IIYEKQFGGL
SYRTNERVTP ETIYDLASLT KVSATLQAVM LLYDRKQISL DEKASKYLPE LAGTNKQNFT
VRDLLLHRSG LVSFYPSLWD RTKTSAGGLL PEYYSSKQDT AYYLQVAPKL FAKGALRDSV
WKWVVESPMN NRRDRAGSYG YLYSDLGFLT LQKIVERVAG QSLDNFVAAN IYEPLGLPYL
GFNPLRRFPE KQIAPTEQDY RFRGQLLQGT VHDQMAAIVG GVSGHAGLFG TARDLAVLLQ
MNLWKGNYAG KRYYEQATVP FFSRMYDESH HRGLGWDKAP ADGNSSFVSP LASVNSFGHT
GFTGTMVWVD PEEDLVFIFL SNRVNPDPEN TAITTHRTRR KIQDVVYGSL IQRKSQLP
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