Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4205 |
Symbol | |
ID | 8227807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5082234 |
End bp | 5086394 |
Gene Length | 4161 bp |
Protein Length | 1386 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644932052 |
Product | hypothetical protein |
Protein accession | YP_003088573 |
Protein GI | 255037952 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA CATTTATTAA AGAAAGTTTA CTTACCATTT TCGCCACGGT GTTCTGCCTG GCAGCTTCAT TTGGACAGAC TGCGATTACA ACGGGAACCA TTACCCCATC ACCAGCTTGC GTAGGAGGTG GCGTTTCCGT ACCATTTACT ACCACCGGAA CGGTACTCCC GGCGGTAATT TTCGTAGCAC AGCTATCCGA TGCGGCAGGC GCTTTCGGAG CTAATCCTGA GGAAATCGGC AGTTCCGCTA CAACGCCTAT TTCGGCAACT ATTCCTGCGA ATGCAACCGC TGGCGCAGGT TATAAAATCC GCGTTGTGTC AAAGTTGGCG GCAGTCATTG AAATTACGGG ATCTGAAAGT GTTGCGCTGA CTGTGAATGC GGTGCCAGCA ACGCCGACGG TTATTTCCCC GGTCGAATAT ACCCAAGGCG CCACCGCTAC TGCGCTGACG GCAACCCCCG CGGCCGATTT GCTTTGGTAT GATGGTCCAA ACGGCGGTAC CGGATCTGCC ACAGCGCCAG TCCCTTCCAC TGAGACTGTT GGGACTACCA GTTACTATGT AGCTCAAAAA CCTGCTGCAT GTGAAAGCGG CCGGGCCAAG ATTGATGTTG TTGTGGCTGC TTGTACGCCA CCTGCTAAAC CTACGGTTTC CAACCAGTCA TACGAAGTTG GCGACGATGC CGCAGTACTC ACTGCAACGG GCACAAATCT CAAATGGTAT ACCGATGCGA CGACTACGAC AGTGCTGCCG TCGGCACCCA AGCCCTCGAC CACTGCGGCA GGAATAACCA AATATTACGT CTCGCAAACC AATGCCAGCG GCTGCGAAAG TGAAAGAGCG GAAATTACCG TCACTGTTAC AGCCTGCACG CCGCCCGCGA AACCTACTGT TGCTAACAAA GCATATGAGG TTGGCGACGA TGCACCGGTG TTAACGGCAA CAGGCACGAA CCTCAAATGG TACACTGATG CAACTACCGG CACAGCATTG CCGTCGGCAC CGAAGCCCTC GACTATCACA GCAGGAATAA CCAAATATTA CGTTTCGCAA ACCAATGCCA GCGGCTGCGA AAGTGAAAGA GCAGAGATTA CGGTAACGGT GACAGCCTGC ACGCCCCCTG CTAAACCTAC GGTAGCCAAC AAATCATACG AAGTGGGCGA CAATGCGCCT GTGCTCACTG CAACTGGCAC GAACCTCAAA TGGTACGCCG ATGCGTCCAC TCCAACTGCC CTGCCATCGG CTCCAAAACC TGCGACTACG ACAGTTGGCA CAACGAAATA TTATGTGACC CAAACCAATG CCAGCGGTTG CGAAAGTGAG AGAGCTGAGA TTACAGTGAC AATTACTGCT TGTACGCCAC CTGCTAAGCC CACTGTTTCC AACAAAACAT ACCAGGTAGG CGAAAATGCA CCAGTTCTCA CGGCAACCGG CACTAATCTC AAATGGTACA CCGATGCATC CACTACGACT GCGTTGCCAT CCGCTCCTAA GCCCGCGACT ACGACGCCTG GCACAACGAG ATATTATGTA ACTCAAACCA ATGCCAGCGG CTGCGAAAGT GAAAGGGCTG AAATTACAGT GACTGTCACA GCCTGCACGC CTCCTGCTAA GCCAACTGTT TCCAACAAAA CATATGAAGT CGGCGACAAT GCACCGGTGC TGACAGCGAC AGGAACCAAC CTGAAATGGT ACGCTGATGC AAACACAACG ACGCCGCTAC CCTCAGCACC GAAACCTTCT ACTGTAAAAG CAGGTGAGAC GAAATACTAC GTAACCCAAA CCAATGCGAT CGGCTGCGAA AGTGATCGTG CGGAAATATT GGTAACAGTT ACATGTAAAG CATTCGCTGG TCCAACCGTA GTGAGCCCAG TGGCCTTCTG CCAAAGCCCT GCGGTGGCAA CGGCATTGAA AGCTACTCCC CTGGCCGGAC ATACGCTGCT TTGGTACTCC ACATCCTCGG GAGGAACGGG ATCACCCGAC GCTCCTGTCC CGCCGACAGA TGAAGCCAAA TCTATTACTT ACTACGTTAG CCAGAAAAGT ACTGCATCCG GATGTGAAAG TGCCCGCAGA GAGATCGTCG TGAACATAAG GGAAGCCGCC AAGCCGACCG TCTCGCCGAT CGAGTACTGT GTGGGAGAAG CAGCGAGCGT ACTCGCGCCA TCCGGCAGCA CATACAAATG GTATGCTGTT GAAACGGGCG GCACACCATT GGCCTCAACA TTCAAGCCTT CCACGACCAA GGATGGCACA ACGCCTTATT TCGTGTCGCT ATCGACAAGC TACCCTTCAC TGGTGTGCGA AAGTGCCCGC GTGAGAGTAA ATGTTGTCGT TAATGCCCGC CCGGCTGCTG TTAGCGCGCT GTCGGAAGCA TTCTGCCAGG AGCGTACGGA TAAAAGCTAT ACTTTCCCGA CGCAAGCCGC GGAAGGAAAT ACTTTGAAAT GGTACACTGC GGCCAACGGG GGCACGGGAG GCACGGCGAC ACCTTCCATT AACCTGAAAG AAGCCAAAGA AACCACATAC TACGTTACAC AGGTGTCGAA CAAAAATTGC GAAAGCACCA CCCGTGTTGC GCAGAAAGTC CTTGTAAAGC CCCTGCCGGC AGTGCCAGGC GTTTCGCAGC CGTTGATCGA ATACTGCCAG TTTATCGTTG CTGATCCATT GAAAGCGACG GCAGTTACCA ATGGCACTTT GAACTGGTTC GGTACAGATG CAACAGGCGG GACTTCCAGC CCAACAGCAC CGATCCCTTC GACTGCCGAA GGTGGAACGA CCTCGTATTA TGTTGCGCAG ACATTGGCCG GATGTATCGG CGACCGTGCG AAAATTGATG TGAAAGTAAA CACAACACCC AAGCCTGCTA CCAAAACATA CCTCGAATAC TGCCAGAACG AAACGGCGCC GGTCCTCGAC GCGACCGGAA GCGTGCTGAA ATGGTACCGC GAAGCCAACG GGACCGAATG GCAGGGTGTA CCATTCACAC CGTTTACCGA AAAGGTGCAG GATTACTCGT TCTACGTGAC GCAAACCGGC AACAACGGTT GCGAAAGCCC GAAAGAAGAG ATCAAAATCC ACATTAAATC CCTGCCTTCG GCGACGATTT CAGGCAACTC CACGATCGAC CTCGGCGAAA GCGCAACGAT CAATATCAAA TTTACCGGCG ACGGACCGTG GATTTACGTG CTCTCCAACG GCACCACCGA CACGACCGAC CAGGCCAACC ACCAGGTACC GGTGACCCCA GCCACAACCA CCAGCTACCT CATCACGGAA GTTTCCAATG CCTGCGGTAA AGGTATTCCC ATCGGCAGCG CGCTGGTGAC CGTGAAAATC CCGACCATTA ATTCGGGAAG CCCCTCGGTT TCGGAGATCT GCGCGGGCAA ACCGTTCACC GTGCCATTCC AGGCGTCGGG CGAGTTCCCT GCCGGCAATA CTTTCAAGTT GCAGGTAGCT ACCGAAAATG CGGACGCGAA GTTCTACACC ATCCCGTCCA CTGTAAGCGG AAATTCGGTA TCGGCCATAT TCCCGGATAC TACTAAGGCC AGTACGTTCT TCCTGCGGGT GATCAGCTCG GGCACCAATC CGGACCTCTC CGTTAAAGGC AGCGTAAGCT CGATCACTAT TAATGCAAGC CCGCTTCCAG TGGCCACCCT CACCGGCACT CAAACCATCC TCGTAGGTGA AACCGCCGAC CTCAAAGCCG AAATCACGGG TAAATCTCCC TGGACATTGA CATTGAACAA CGGCACGAAG GACACACTCA TCACTGCGAA TGCGACGCCG TACGTTTTCA AACTTGCGCC GAAAACCACC ACTACCTACG CCATTACCAA AGTAACCAAT GGCTGCGGCA TCGGCACGGG CGTAGGAACG GCGCGCGTAC AAGTTGATCC GATCCTCGGC GTAGAACCTC CTGCCCCTGC AACGTGGGCC AAGGTTTACC CAACGGTGAT TAATGGCAAA TGTACGGTGG AAGTAACCGG CACTATTTCG GCCAAACAGG CAACGATCGA AGTAGTAGAC CTGAATGGTC GCCCGCGTTC AGCACAGGCC ATCAAACAGC AAAAAACAGA GGTTGATTTC GCAAACTATC CGTCGGGACT TTACCTGCTG CGGATCAAGA ACGGTAACCT GAGCACCGTT CAGCGCGTGA TGAAACCCTG A
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Protein sequence | MKRTFIKESL LTIFATVFCL AASFGQTAIT TGTITPSPAC VGGGVSVPFT TTGTVLPAVI FVAQLSDAAG AFGANPEEIG SSATTPISAT IPANATAGAG YKIRVVSKLA AVIEITGSES VALTVNAVPA TPTVISPVEY TQGATATALT ATPAADLLWY DGPNGGTGSA TAPVPSTETV GTTSYYVAQK PAACESGRAK IDVVVAACTP PAKPTVSNQS YEVGDDAAVL TATGTNLKWY TDATTTTVLP SAPKPSTTAA GITKYYVSQT NASGCESERA EITVTVTACT PPAKPTVANK AYEVGDDAPV LTATGTNLKW YTDATTGTAL PSAPKPSTIT AGITKYYVSQ TNASGCESER AEITVTVTAC TPPAKPTVAN KSYEVGDNAP VLTATGTNLK WYADASTPTA LPSAPKPATT TVGTTKYYVT QTNASGCESE RAEITVTITA CTPPAKPTVS NKTYQVGENA PVLTATGTNL KWYTDASTTT ALPSAPKPAT TTPGTTRYYV TQTNASGCES ERAEITVTVT ACTPPAKPTV SNKTYEVGDN APVLTATGTN LKWYADANTT TPLPSAPKPS TVKAGETKYY VTQTNAIGCE SDRAEILVTV TCKAFAGPTV VSPVAFCQSP AVATALKATP LAGHTLLWYS TSSGGTGSPD APVPPTDEAK SITYYVSQKS TASGCESARR EIVVNIREAA KPTVSPIEYC VGEAASVLAP SGSTYKWYAV ETGGTPLAST FKPSTTKDGT TPYFVSLSTS YPSLVCESAR VRVNVVVNAR PAAVSALSEA FCQERTDKSY TFPTQAAEGN TLKWYTAANG GTGGTATPSI NLKEAKETTY YVTQVSNKNC ESTTRVAQKV LVKPLPAVPG VSQPLIEYCQ FIVADPLKAT AVTNGTLNWF GTDATGGTSS PTAPIPSTAE GGTTSYYVAQ TLAGCIGDRA KIDVKVNTTP KPATKTYLEY CQNETAPVLD ATGSVLKWYR EANGTEWQGV PFTPFTEKVQ DYSFYVTQTG NNGCESPKEE IKIHIKSLPS ATISGNSTID LGESATINIK FTGDGPWIYV LSNGTTDTTD QANHQVPVTP ATTTSYLITE VSNACGKGIP IGSALVTVKI PTINSGSPSV SEICAGKPFT VPFQASGEFP AGNTFKLQVA TENADAKFYT IPSTVSGNSV SAIFPDTTKA STFFLRVISS GTNPDLSVKG SVSSITINAS PLPVATLTGT QTILVGETAD LKAEITGKSP WTLTLNNGTK DTLITANATP YVFKLAPKTT TTYAITKVTN GCGIGTGVGT ARVQVDPILG VEPPAPATWA KVYPTVINGK CTVEVTGTIS AKQATIEVVD LNGRPRSAQA IKQQKTEVDF ANYPSGLYLL RIKNGNLSTV QRVMKP
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