Gene Dfer_4204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4204 
Symbol 
ID8227806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5081710 
End bp5082162 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content55% 
IMG OID644932051 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003088572 
Protein GI255037951 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.906022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCC AGGCAGACAT AACCGACCAC TTCTTTATGG AGGAAGCCCT CGCGCTCGCC 
CACAAAGCGT ATGAAGAGGG CGAAATCCCG GTGGGCGCAT TGGTGGTGGC CAAAGACCGG
ATCATCGGTC GGGGTTACAA CCAAACCGAG CGCCTCAACG ACGTCACCGC CCACGCCGAG
ATGATCGCCA TCACCGCCGC CGCCGACCAT CTCGGTTCGA AATACCTTAC TGATTGTACA
CTCTACGTGA CATTGGAGCC TTGCGTGATG TGCGCAGGCG CGCTCTACTG GACGCAGGTG
AAGCGCGTGG TAGTGGGCGC GATGGACGAA AAGCGCGGAT TTTCGCGGGT CGGACAGCCG
CTTTTACACC CCAAAACCAA ACTTGTAACC GGCATAATGG CCACGGAATC GCAGGAGTTA
CTACTCAAAT TTTTCAGGCA ATTAAGAACA TAA
 
Protein sequence
MNIQADITDH FFMEEALALA HKAYEEGEIP VGALVVAKDR IIGRGYNQTE RLNDVTAHAE 
MIAITAAADH LGSKYLTDCT LYVTLEPCVM CAGALYWTQV KRVVVGAMDE KRGFSRVGQP
LLHPKTKLVT GIMATESQEL LLKFFRQLRT