| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4202 |
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| Symbol | |
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| ID | 8227803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5079376 |
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| End bp | 5080596 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644932048 |
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| Product | integrase family protein |
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| Protein accession | YP_003088570 |
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| Protein GI | 255037949 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGAGA AAACATTCGG CCTGCTTTTC TATTTAAAGC CCGCCAGAAA TCAGAAGGGA
ACAGTTCGCT ACGTTTACCT GAGAATCACC GTCGACGGCA AGGTTGCCGA GCTATCCACC
AAGAAACTAT GGAACACTGA AAGGTGGAAT TCCTCAGTCG GACGACCTGC CGGAAATAAG
GAAGATGCAA AGACGCTGAA TGCGTACCTG GATATGCTCA CCGCCAAAGT TTACCAGGCC
AAGAAAATTC TTACCGAGGA TGACAAAGAA ATTTCCGCAG AAGGCTTGAA AAACATCCTG
CTCGGTAAGA GCAATGAAAC CCGCACTATT CTTGAAGTAT TCGAGCGTCA TAATGAGCAG
ATGGAAGCAT TGGTCGGTCA GGAGTTCGCG CCGCTCACTT TGAAGCGGTA CAAGACCGCG
AAGGAGCATA CCGCTTCCTT TATCAAGTGG AAGTACAAGA AGGACGATAT GGAGATCAAA
GATCTGAATT TTGAGTTCAT TACTGAATTT AACTTCTGGC TCCGTAGCGC GCGGGGTTGC
AACCACAACT CGGCGATTAA GTACATGAGC AACCTGAAGA AGGTTGTGCT GATCTGCGTC
AATAATAAGT GGTTGAAGAA AGACCCGTTT CAGGGCTTTA AGCTGACTAA GAAGGAAGTC
GTTAAGAACC CGTTGTCTCG GGATGAATTG AAGCGGCTTA CTGAGAAAGT GTTCGAGGTT
GAAAGGATCA GCCAGGTGCG GGACATTTTT CTCTTCTGCT GTTACACCGG GCTAGCTTAT
GTAGATGTGA AGCAATTAAA GACGACGGAT ATTGTTGTCG GCATGGATGG CGAACCGTGG
ATTGATACCA CGCGGCAGAA AACGGACGCA CCTACACGTA TTCCGTTATT GCCTACTGCG
CTTGACATTA TCGAGAAGTA CAAGGAGCAT CCTCAGTGCT GCAATAAGGG CGTTGTGCTG
CCGGTTCTGA GTAATCAGAA GATGAATGCT TATTTGAAGG AGATTGCTAA CCTATGTGGG
ATTTCCAAGA CGCTCACCTT TCACATTGCG CGGCATACGT TTGCCACTAC TGTGACGCTG
AGTAACAAGG TGCCGATTGA GACGGTTTCG AAAATGCTGG GGCATCGGTC TTTGAAGCAG
ACTATGATTT ATGCGAAAAT ACTGGATGTG AAGATTAGTG AGGATATGAA GGGATTAAGG
GAGCGGTTGA AGGGGAAATA G
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| Protein sequence | MLEKTFGLLF YLKPARNQKG TVRYVYLRIT VDGKVAELST KKLWNTERWN SSVGRPAGNK
EDAKTLNAYL DMLTAKVYQA KKILTEDDKE ISAEGLKNIL LGKSNETRTI LEVFERHNEQ
MEALVGQEFA PLTLKRYKTA KEHTASFIKW KYKKDDMEIK DLNFEFITEF NFWLRSARGC
NHNSAIKYMS NLKKVVLICV NNKWLKKDPF QGFKLTKKEV VKNPLSRDEL KRLTEKVFEV
ERISQVRDIF LFCCYTGLAY VDVKQLKTTD IVVGMDGEPW IDTTRQKTDA PTRIPLLPTA
LDIIEKYKEH PQCCNKGVVL PVLSNQKMNA YLKEIANLCG ISKTLTFHIA RHTFATTVTL
SNKVPIETVS KMLGHRSLKQ TMIYAKILDV KISEDMKGLR ERLKGK
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