| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4178 |
|---|
| Symbol | |
|---|
| ID | 8227776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5045076 |
|---|
| End bp | 5046410 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644932021 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_003088546 |
|---|
| Protein GI | 255037925 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0936501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAACTCT GGCAAAAGGA AAATACTGTT ACCTCTGAAA AAATAGAACG CTTCACCGTC
GGGCGCGACC GTGAAATGGA TATTCATCTC GCCGAATTCG ACGTGCTGGG CAACATCGCC
CACGCCACCA TGCTCGAAAC CATCGGCCTC CTCACCGCCG ACGATCTGGC CGCATTGAAA
ACCGAACTCA AAGCCATTTA CCAGCAAATC CAGGCGGGCG AATTCGTGAT CGAGGAAGGC
ATCGAAGACG TGCATTCGCA GGTAGAACTG CTGCTCACCC GCAAGCTCGG CGACACGGGC
AAAAAAATCC ATTCGGGCCG CTCCCGGAAC GACCAGGTGC TGGTGGACAT GAAACTCTAC
ACCCGCGCGC GCCTCTTCGA GGTGGTACAG GCTACCGAGA AGCTTTTTGA TGTGCTTTCG
CGCAAATCGG AGGAACACCG GAACGATCTC CTGCCAGGAT ACACGCATTT ACAGATTGCC
ATGCCGTCGT CGTTCGGGCT GTGGTTTGGT GCCTATGCCG AAGGACTTAT TGACGATATT
ATCCAGCTGA ACGCCGCCTA CCGCCTCGCC AACCGCAATC CGCTGGGTTC GGGCGCAGGT
TACGGCTCAT CGTTCCCGCT GAACCGCCAG CTCACCACCG ACCTGCTCGG TTTTGAAGGA
ATGCACCATA ATGTGGTGTA CGCCCAAATG AGCCGCGGCC GCACCGAGCA GGCCGCATTG
AGCGCGATCG CTTCCCTCGC CGCAACGGTA TCGAGGCTGG CGATGGACGT GTGCCTGTAC
AACAGCCAGA ACTTCGGCTT CATCGTCCTC CCCGACGACC TCACGACCGG CAGCAGCATT
ATGCCGCATA AAAAGAACCC CGACGTAGCC GAACTCCTCC GCGCCAAAAC CAACCGCATG
AAAGCATTGC CGATGGAAGT GACGATGGTG CTGAGCAACC TGCCATCGGG CTACCACCGC
GATATGCAGC TCCTGAAAGA AATCCTGATG CCTGCATTCG ACGAAATCCT GGACTGCCTG
GACATCGCCG CATTCATGCT CGAACATATG AAAGTGAAGC AAAACCTGCT CGACGACCCG
AAATACGATC TGCTGTTCAG CGTGGAGCGT GTAAACGAGC TCGTGCTTGC CGGAGTGCCT
TTCCGCGACG CTTACAAGCA GGTGGGCGCG GAAATCGGCG ATGGCAGCTA TACGGCACCG
CGTGAACTGA AACACTCGCA TGAGGGGAGT ATTGGCAATT TGCAGACGGA ACAAATCCGT
GCGCGAATGG AACGTGAGAT CGCCGCGTTC GGATATGATG AAGTGCTTGA AACGCTTTCC
AAACTGATCC GTTAA
|
|---|
| Protein sequence | MKLWQKENTV TSEKIERFTV GRDREMDIHL AEFDVLGNIA HATMLETIGL LTADDLAALK
TELKAIYQQI QAGEFVIEEG IEDVHSQVEL LLTRKLGDTG KKIHSGRSRN DQVLVDMKLY
TRARLFEVVQ ATEKLFDVLS RKSEEHRNDL LPGYTHLQIA MPSSFGLWFG AYAEGLIDDI
IQLNAAYRLA NRNPLGSGAG YGSSFPLNRQ LTTDLLGFEG MHHNVVYAQM SRGRTEQAAL
SAIASLAATV SRLAMDVCLY NSQNFGFIVL PDDLTTGSSI MPHKKNPDVA ELLRAKTNRM
KALPMEVTMV LSNLPSGYHR DMQLLKEILM PAFDEILDCL DIAAFMLEHM KVKQNLLDDP
KYDLLFSVER VNELVLAGVP FRDAYKQVGA EIGDGSYTAP RELKHSHEGS IGNLQTEQIR
ARMEREIAAF GYDEVLETLS KLIR
|
|---|
| |