| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4176 |
|---|
| Symbol | |
|---|
| ID | 8227774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5041822 |
|---|
| End bp | 5043420 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644932019 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003088544 |
|---|
| Protein GI | 255037923 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.233001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA AAAAGATATC ATCAGTTATT TTGGCAGGGC TCATGCTGGT GGCAGCGTCC
TGTAAAGAGT CCGATTTCAG CGACGTTTAC CCTGATCCTT CGAAGATCTC CGAAACGACC
GTTGAGAAGC AGTTCACAGG GTTTCTTCAA TCCAACAAGG ACTATGTTCT GCCGGGCTAC
CTGCATTACT TTACATTGCT CCGTGTAACA TTGAACCAAT ACAACCAGAC AATCGGCTGG
ATCAATGCTT CGGGACAGTA CGTTCCGGGA TCTGCGGGTG TGGAAAACAT CTGGTTCAAC
TACTATAACC TGCTGGCGCA ATACCGCGAG CTGGAAAAAG TGTACAACTC CAAATCTTCG
ACTGAGCAGG CTGACCGCAA GTTCTTCATG ACCGTTGCGA AAGTTTACCT CTACGACCAG
ACTCAAAGAA TGATCGACGT GTTCGGAGCG ATTCCGTTCA CCGAGGCAGG TATGCTGAGC
ACCAAAGGCG GAGACTACAC TTCTTCCGCA GCGAAGTTCG ACGATCCTCA GGCGCTTTAC
ACGCTGATGC TCGACGATCT GAAAGCGATC TCGGCGGAAC TGAATGCAAC GACCATCAAC
GCAGGTTACC AGCAGTCGTT CAAAACGCAG GATTTCGTGA ACAAAGGCGA CCTCACTGCC
TGGAAACGTT ACTGCAACTC GCTGCGTCTT CGCATGCTGA ACCGCGTGTC GGATGTTGCG
GCATTCCAGT CGCGCTCTAA CTCGGAAATC GCCGAGATCC TGGGTAATGC AACTACTTAT
CCGGTGGTTG AAAACAACGA TCAAAACATT CAGATCACCG TTTTTGATAT CAACAGCGGT
ATCAACTCGA AAGGGTTCCA GGATGGTATC GCATCAAGCG GTGAATGGTA CGGTAACACA
GCCGGCAAGA AACTGGTCGA CTTCCTGAAC ACCAACGCTG ATCCACGTTT GCGATTGTTG
TTCGAGCCGG GTGCTAATGC AAAAGGTGCT TACATCGGTA TCGATCCACT TGGAACAGCT
GCTACACAGC AGGCATTGGC ACAGTCCGGA CAAGTTGCGA TTTACAACCG TTACGTAACC
AGCCACAACC AGTTTTTCCC AGGTATCATT ATTAATGCTC CTGAGGTTAA CCTGATCAAA
GCTGAGTATT ACCTGAGAAC CGGTAACGAC GCATCTGCTA AAACGGCTTA CGAAACTGCA
ATTGCTCAGT CGATGGATTT CTATAACCGC ATTAACAACA TCAGCAATGC GGCACAGGGA
ACCAAGCCTG CCAACGTAAC CACTGCCGAG GCAACTGCCT ACATCGCAGG AAACGGCGTA
AGCTGGGCAA AAGCGACTAC GCCTGCTCAG AAACTGGAAC TGATCGCGGC TCAGAAGTGG
GTACATTACA ATCTGGTGCA GCCATACGAA AACTGGGCGG ACATCCGTCG TTTGAATATG
CCTTCGCTCT CGTTCTGGGT GGATAACAAC AACAACCAGA CGCAGCCGCC GGTACGCCTC
AACTACCCAG GCAACGAAAT CACTTACAAC CCGCAGAACT ATGCGGCCGT TCGTGAAAAC
GATAAACTCA CTACCAAGCT ATTCTGGGAT GTGAAATAA
|
|---|
| Protein sequence | MKMKKISSVI LAGLMLVAAS CKESDFSDVY PDPSKISETT VEKQFTGFLQ SNKDYVLPGY
LHYFTLLRVT LNQYNQTIGW INASGQYVPG SAGVENIWFN YYNLLAQYRE LEKVYNSKSS
TEQADRKFFM TVAKVYLYDQ TQRMIDVFGA IPFTEAGMLS TKGGDYTSSA AKFDDPQALY
TLMLDDLKAI SAELNATTIN AGYQQSFKTQ DFVNKGDLTA WKRYCNSLRL RMLNRVSDVA
AFQSRSNSEI AEILGNATTY PVVENNDQNI QITVFDINSG INSKGFQDGI ASSGEWYGNT
AGKKLVDFLN TNADPRLRLL FEPGANAKGA YIGIDPLGTA ATQQALAQSG QVAIYNRYVT
SHNQFFPGII INAPEVNLIK AEYYLRTGND ASAKTAYETA IAQSMDFYNR INNISNAAQG
TKPANVTTAE ATAYIAGNGV SWAKATTPAQ KLELIAAQKW VHYNLVQPYE NWADIRRLNM
PSLSFWVDNN NNQTQPPVRL NYPGNEITYN PQNYAAVREN DKLTTKLFWD VK
|
|---|
| |