| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4163 |
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| Symbol | |
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| ID | 8227761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5023218 |
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| End bp | 5024270 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932006 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003088531 |
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| Protein GI | 255037910 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000250075 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.807389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA AACTCATCAT CATCGGTTCC ATCGTCCTCA TCGGCGTTTT GATCGGCGTA
AGATTGGTCG CCAACAAGGC TAAGATCGAC GAGAAGAAGA AAATGCCCGA CAATAAAAAC
GTTACCATTC CGGTAACGGC CATGGCCGTG AAGGAAGGCA GCGCGGATCA GCAACTGATC
CGCACGGGTA GCCTCATTCC ATATAAAGAA GCGGAAATCA TGGCCACCGC AGCCGGTAAA
GTGCTTTCTG TGAAATATGA ACTCGGCTCG CACGTACAGC AAGGCGCGAC GATCGTGAAA
GTGGACAGCA AGCTGAAAGA GCTGTCGCTC GAAGCTACGG AACTCAATAT TAATAAATTG
AAGAAAGACA CCGACCGCTA CAACAAGCTT TTGGCAGGTA ATGCAGCCAC CGAAGTTCAG
GTGAACGATA CCAAGTACAA CTACGACAAT GCATTGAACC AGGCCGAGCA GATCAAACAG
CAGATCAGCG ACGCGTCCAT TCAGGCGCCG ATCAGCGGCC GCATTGTGAA GAAGAACATC
GAGCCGGGCG AGTTTGTGAA CGTGGGCACT TCGCTGGGGA CCATCCTGGA TGTATCGCGC
CTGAAAGTGC AGGTGATGAT CAATGAAAAT GATGTGTACA AGCTCAAAGA AGGCCAGCAC
GTGGCGGTGA GCACCAGCAT TTTCCCTGGT AAAAAGATCG ATGGCGTGAT TTCCTACATC
GCTCCGCAAG GCGACGAGTC GCACAACTAT CCGGTGGAAA TTACGGTGAA AAACTCGACG
GAACTGAAAG CGGGTACATT CGTGAGTGTG GAATTCCAGC AAAAAAGCAG CGCGCAGTCG
CTCCTAATCC CGCGCAGCGC CCTCGTGGAA AGCGTGCGTA ACCCGTATGT GTACGTGGTG
GAAGGCAATG TGGCCAAGCA GCGCAAGATC GAAGTGGGCC GCGAAGTGGG CGACAATGTG
GAAGTACTCG GCGGCCTGAA AGCGGGTGAA ACGGTGGTGA CGACCGGCCA GATCAACCTC
AGCGAAGGCG CCGCGGTGAC CGTTACAAAA TAA
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| Protein sequence | MKRKLIIIGS IVLIGVLIGV RLVANKAKID EKKKMPDNKN VTIPVTAMAV KEGSADQQLI
RTGSLIPYKE AEIMATAAGK VLSVKYELGS HVQQGATIVK VDSKLKELSL EATELNINKL
KKDTDRYNKL LAGNAATEVQ VNDTKYNYDN ALNQAEQIKQ QISDASIQAP ISGRIVKKNI
EPGEFVNVGT SLGTILDVSR LKVQVMINEN DVYKLKEGQH VAVSTSIFPG KKIDGVISYI
APQGDESHNY PVEITVKNST ELKAGTFVSV EFQQKSSAQS LLIPRSALVE SVRNPYVYVV
EGNVAKQRKI EVGREVGDNV EVLGGLKAGE TVVTTGQINL SEGAAVTVTK
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