Gene Dfer_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4161 
Symbol 
ID8227759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5021255 
End bp5021722 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content46% 
IMG OID644932004 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003088529 
Protein GI255037908 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000235966 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.7718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA ACATAGATAG CTGGCAGAAC CTTCGGGAAG AATTGAAGAA CTCATTGCAG 
TTCAAACTGG GGGCTGTCAC GAAAACTGTT TTCAAGAAAA TGAATGCCGA GCTGGTCAAT
GAGGGGATAC CCGTGCTGGC CGAGCAGCTT CCTATTCTGA TGGTTGTATA TTTCCAGGAA
CAGGCGCGAA CGCAGCAGGA CATTGCCAAT ATTTTGCAAA AAGATAAAGC GGGAATCCAG
CGTTCTGTGC AGACATTGCA TAAGGATGGT TTCCTGAAAA TTGAAAGTGA TATTGAGGAC
AAAAGAAAGA ACCTGATTTC ACTGACGCCG AGCGGCAAGT TTGTCTGCGA GCGCATTCAG
TCGCTGGCTA TCGCATTCAA CAATCAGATT ATGGAGCATT TTAGCGAGCA GGAATGGGAT
ACGTTCCTGG GTTACCTGGA CCGCGTCGTG AAAGTAGTAG ACAAATAA
 
Protein sequence
MSANIDSWQN LREELKNSLQ FKLGAVTKTV FKKMNAELVN EGIPVLAEQL PILMVVYFQE 
QARTQQDIAN ILQKDKAGIQ RSVQTLHKDG FLKIESDIED KRKNLISLTP SGKFVCERIQ
SLAIAFNNQI MEHFSEQEWD TFLGYLDRVV KVVDK