Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4160 |
Symbol | |
ID | 8227758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5019629 |
End bp | 5021098 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644932003 |
Product | peptidase M48 Ste24p |
Protein accession | YP_003088528 |
Protein GI | 255037907 |
COG category | [R] General function prediction only |
COG ID | [COG4784] Putative Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0504491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGA AATACGCATT TCGCATTCTG CCGGCAGTTG TGGCGGCTGG AATGCTCGCA GGCTGTTCTA AAAATCCGGT GACGGGCAAA AAAGAGATCG TCTTCATGTC CGAAGAAAAG GAAAAAGCGC TCGGAGCCGA ATCGCACCCG TCTATTGTGG CAACAATGGG CATTTACGAT GATAAAAACC TGCAATCCTT CATCAATGAA AAGGGGATGG CGATGGCCAA AATTTCCCAC CGGCCGGAAT TGCCCTACAA ATTCTTCATC GTAGACTCGC CCGTCGTGAA TGCATTTGCG GTGCCTGGCG GTTACGTATA CTTTACACGG GGAATTATGG CGCATTTCAA TAATGAAGCA GAATTCGCCG GGGTACTAGG CCACGAAATC GGCCACATTA CCGCCCGCCA CTCGGCGCGT CAGCAAACTT CCCAGATTTT TGGTCAGGTA GGTCTGGCGG CCGGGATGAT CCTCTCGCCG CAGGTCCGCG CCATGGGCGA GCAGGCGCAG CAGGCATTGG GCTTGCTCTT TTTGAGTTAC AGCCGCGATC ACGAGACCGA ATCGGATAAA ATCGGGGTGG ATTATTCAAG CAAAATCGGG TACGATGCGA AAGAGATGGC CGATTTCTTT GGTACACTGA AACGCATCTC TGAAAAGGCC GGACAGTCTA TTCCTACTTT CCAGTCTACC CACCCCGATC CGGGCGACCG TATGTCGAAG GTGAGCAAGC TGGCAACGCA ATACCAGACC GAGCATCCGG GCAAATACAA TGTGAACCGT GATGCGTACC TGCGCAAAAT CGACGGCATT ATATATGGTA ATGATCCGCA GCAGGGATTT GTGGAGAACA ACACGTTTTA CCACCCGTCG CTGAAATTCC AGTTCCCGGT GCCGAGCGGC TGGCAGTATG AAAACTCCCC GGCGCAGTTT CAGATGGCCG CCAAAGACGG TAAATCAATG ATGCTGTTCA CGCTCGCGCA AGGCAAAAGG TTGGAAGAAG CCGCGCAGAC AGTGGTGAAA AACTACGGTT TGAAAGTGAT TGACAATGAA AAGGCCACTA TTAATGGCAA CCCCGCGATC GTGATGACGT CGCAGCAGGT GGAGCAGGGT GCGAATGGAC AGGCTGCGGC AGCAACGGCA AATACGATCC AGGTGGCGAC GTGGCTGATC CAGTACGGCG GCAATATTTA CGCGATCCAC GGCGTGGCTG CGGCGGGTAA CTTCGCGGCG AATGCCGGAC AGTTCCGCTC GGTAGCGCAG GGCTTCAAAT CCGTTTCGGA TGGCAATATT CTCAACCGCC AGCCGGAGCG TATCCGCATC AAAACCGTGC AGCGCGACGG CACACTGCGC GACGCGCTGA AAGATGCGAA CCAGCCTGAT AATAAGCTGG ATGAGCTCGC GATCATCAAC GGTATGGCGC TCACGGACAA GGTGACGAAA GGCTCGCTTT TCAAGACACT GGGCAAGTAG
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Protein sequence | MKMKYAFRIL PAVVAAGMLA GCSKNPVTGK KEIVFMSEEK EKALGAESHP SIVATMGIYD DKNLQSFINE KGMAMAKISH RPELPYKFFI VDSPVVNAFA VPGGYVYFTR GIMAHFNNEA EFAGVLGHEI GHITARHSAR QQTSQIFGQV GLAAGMILSP QVRAMGEQAQ QALGLLFLSY SRDHETESDK IGVDYSSKIG YDAKEMADFF GTLKRISEKA GQSIPTFQST HPDPGDRMSK VSKLATQYQT EHPGKYNVNR DAYLRKIDGI IYGNDPQQGF VENNTFYHPS LKFQFPVPSG WQYENSPAQF QMAAKDGKSM MLFTLAQGKR LEEAAQTVVK NYGLKVIDNE KATINGNPAI VMTSQQVEQG ANGQAAAATA NTIQVATWLI QYGGNIYAIH GVAAAGNFAA NAGQFRSVAQ GFKSVSDGNI LNRQPERIRI KTVQRDGTLR DALKDANQPD NKLDELAIIN GMALTDKVTK GSLFKTLGK
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