Gene Dfer_4154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4154 
Symbol 
ID8227752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5013806 
End bp5014414 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content46% 
IMG OID644931997 
Productprotein of unknown function DUF177 
Protein accessionYP_003088522 
Protein GI255037901 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.396249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTA TTAAACTGAA ACACATTACC TTTGCACTCC TTTTGACAGA AAAAGTGAAA 
GAGCTAAGTA AATACAACAT AGACATTTAC GGTTTGGAAG ACAAACAGTA TGACTATGAT
ATGGAATCCG GCGATGCTTT TTTTGAGGAA ATGGAGCAGG ATCTGATCGA GCACGGGCAG
TTCAAAACGC ACGTGACGCT CAACAAATCG GCAACGATGA TCCAGCTTCG TTTTCATACC
GAGGGAAGCG TGACCCTTGC CTGTGACCGC ACACTCGAAC CGTTCGAAGA ACCGATTGAT
TCCGACGAAC GCATTATATT AAAGTTCGGC GATCACAACG AGGAGCTGAC GGAAGAGATT
GAGATCATCA GCCGTAACAC CAACAGGATC AATGTAGCGC GTTACGTTTT CGACTTTATC
GCGTTGTCGC TCCCGGTCAA AAAGCTCCAT CCGAGCCTGC GCACCGAGGA AGACGAGTTT
GACCTGGAAG ATGATGAGGA AGAAGGAACG CTGGTGTATA CCTCGGGAGA AACGGAGGAA
GGGGAAGAAG GGGAGGAAGA AGAAAAGATC GATCCTCGCT GGGAAGCCTT GAAGAATTTG
AAAAAATAA
 
Protein sequence
MFFIKLKHIT FALLLTEKVK ELSKYNIDIY GLEDKQYDYD MESGDAFFEE MEQDLIEHGQ 
FKTHVTLNKS ATMIQLRFHT EGSVTLACDR TLEPFEEPID SDERIILKFG DHNEELTEEI
EIISRNTNRI NVARYVFDFI ALSLPVKKLH PSLRTEEDEF DLEDDEEEGT LVYTSGETEE
GEEGEEEEKI DPRWEALKNL KK