Gene Dfer_4151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4151 
Symbol 
ID8227749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5011394 
End bp5012389 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content52% 
IMG OID644931994 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_003088519 
Protein GI255037898 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.304596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATA TTAAAGCCTC TATAACAGGA ATACAAGGGT ATGTGCCTGA TTATGTGCTG 
ACTAATGCAG AATTGGAAAC AATGGTGGCA ACGAACGACG AATGGATCGT TAGCCGCACA
GGTATCAAAG AAAGACGTAT TCTGAAAGGC GAAGGTTTAG GAAGTTCACA TATGGGTGCC
GAGGCTGTAA AGGGATTGCT CGCCAAAACC AATACAAAGC CCGAGGAAAT CGACCTGCTC
ATCTGCGCTA CTACCACACC CGATTTTGTA TTCCCCTGCA CGGCCAACCT CATCTGCGAC
ATGGTGGGCA TCCGTAACAT CGGAAGTTTC GACATCCAGG CAGCCTGCTC GGGTTTTATT
TATGCATTGA CACTCGGCTC GCAATTCATC GAGACGGGAA AATATAAAAA GGTGATCGTC
GTAGGTTCGG ATAAAATGTC CGCGATCGTC GACTACACCG ACCGCAAGAC CTGTATCCTT
TTCGGCGACG GCGCCGGCGC TGTGCTGCTC GAACCGGACA CCGAAGGAAA CGGCATTATC
GACTCGATTA TCAAATCGGA CGGTGCGGGG TATCCCTACC TCAACCAGAA AGCGGGAGGA
AGCCGCTACC CGCCTACCCA CGAAACGGTA GATAACAGGC TGCATTACGT TTACCAGGAT
GGTGCGCAGG TTTTCAAATT TGCCGTAACC AATATGGCCG ACATTGCGGC CGATATTATG
GAGCGCAACG GGCTTACCAG CGAAAATACC GCGTGGCTCG TCCCTCACCA GGCCAACCGC
CGGATCATCG AGGCTACCGC CAACCGGATG GGCGTAGGGA TGGATAAGGT GATGATGAAT
ATTCACAAGT ACGGTAACAC CACGGCAGCG ACCATTCCCT TGTGCCTGTG GGACTATGAA
TCACAACTCA AAAAAGGGGA TAACCTGATA CTCGCCGCAT TCGGCGGAGG CTTTACCTGG
GGCGCCATGT ACCTCAAATG GGGTTACGAC GCCTAG
 
Protein sequence
MTHIKASITG IQGYVPDYVL TNAELETMVA TNDEWIVSRT GIKERRILKG EGLGSSHMGA 
EAVKGLLAKT NTKPEEIDLL ICATTTPDFV FPCTANLICD MVGIRNIGSF DIQAACSGFI
YALTLGSQFI ETGKYKKVIV VGSDKMSAIV DYTDRKTCIL FGDGAGAVLL EPDTEGNGII
DSIIKSDGAG YPYLNQKAGG SRYPPTHETV DNRLHYVYQD GAQVFKFAVT NMADIAADIM
ERNGLTSENT AWLVPHQANR RIIEATANRM GVGMDKVMMN IHKYGNTTAA TIPLCLWDYE
SQLKKGDNLI LAAFGGGFTW GAMYLKWGYD A