| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4134 |
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| Symbol | |
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| ID | 8227732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4994306 |
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| End bp | 4994875 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644931977 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003088502 |
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| Protein GI | 255037881 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.456316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGAGT ATAACTCCGC CGTTCTTCAA GAACTACTCG ACGGCTGTTT ACAAAAAAAC
CGCCGCAGTC AGGAGCTGTT ATACAAGCAG TTCTACGGCT ATGCTATGAG CATTTGCTTA
CGCTATACAC GCAGCCGGGA AGAGGCGAAA GAAATACTCA ACGATGGATT TTTGAAGGTT
TTCACGAAGC TGGACAGTTT CGATGCAAGC CGGCCATTTA AAACCTGGTT GAGCAGAATC
ATGATTAACA CAGCCCTCGA TCATTACAGA CAGGAAGTTC GCAGAGATGT TTTTGACGAC
GTGGAGGTGG CGGAACAGGT GTCCGTCGAC GAAACGGTTA TCAGCAAGCT TTCCCACGAA
GAGCTGGTCG GATTGATCCA GCGCCTGACG CCCGCATACC GGCTGGTTTT CAGCTTGTCG
GTCATTGATG GCTATACACA CGAAGAGATT GCAGAACAAC TGAATATTTC GGTTGGGGCG
TCAAAGTCGA ATTTGTCGCG TGCAAGGGAA AAGTTGAGAG AAATGTTATC CAAGATTAGT
ATTGACGACT ATGATAGAGT TGCCAGATGA
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| Protein sequence | MPEYNSAVLQ ELLDGCLQKN RRSQELLYKQ FYGYAMSICL RYTRSREEAK EILNDGFLKV
FTKLDSFDAS RPFKTWLSRI MINTALDHYR QEVRRDVFDD VEVAEQVSVD ETVISKLSHE
ELVGLIQRLT PAYRLVFSLS VIDGYTHEEI AEQLNISVGA SKSNLSRARE KLREMLSKIS
IDDYDRVAR
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