| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4129 |
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| Symbol | |
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| ID | 8227727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4985657 |
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| End bp | 4988134 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931972 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_003088497 |
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| Protein GI | 255037876 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.170203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACT CGGACATGGA TAGCCTCGAA ATCGTTCCAC TTGGCGGCCC CGATGGCTCC
GACGAGCCTT TTGAACTTCC CAATGAATTA GCGATACTTC CTATCAGGCA AACAGTACTT
TTTCCCGGAA TGGTTATTCC GGTAACCGTA GTGCGCCAGA AAGCCATCCG GCTTGTTAAA
AAGATATACC GTAATTCCGA CATCAATCAG CGTATTCTCG GTGCCGTCAC CCAGGCGATC
CCCAACAAGG AAGACCCTAC GGCCGAGGAC CTTTACAACA TCGGTACCGT TGCCCAGATC
CTGAAAATGA TTACCCTGCC GGATGGCAAT GTAACCATCA TCGTTCAAGG CCGGCAGCGC
TTCGAGATCA AGTCGATTGT GAACGAAGAG CCTTACCTTA CTGCCGAGGT GCGGGCGATC
GAGGATTCAT TTGTGGGGCC TACCAAAAAA GAAGCGAAAG CACTGCTGCA ATCGCTTCGT
GACGGCGCGC ACAAGATCAT GCGCCTGAAC CCGGAGATCC CGCAGGAAGC GCGCATTGCC
CTCGATAACA TTGAAAGTCC GATATTCCTG ATCCATTTCC TGTCGTCGAA CATCAATGTA
GAAGTAGCCG ACAAGCAAAA GCTGCTTGAA GAGCGCAATG GCCATAAGCA AGCCACGCTT
TTGCTGCAAT ACATGATGCG GGAAATCGAA ATGCTCGAAC TAAAACGGGA AATCCAGACC
AAAGCCAGCT CGGACATCGA CCAGCAACAG CGCGACTATT TCCTGCGCCA GCAGATCAAG
GTGCTGCACG ATGAGCTGGG CATGGACAGC CCCGAGCGCG ACCTGGACGA AATACGCCTC
AAAGCCAGCC AGAAAAAATG GACGGACGCG GTGAAGGCGC ATTTCGACAA AGAACTTAGC
AAACTGCAAC GCATTAACCC GATGGCGCCT GAATACCCGG TAACGATGAA TTACCTGGAA
ACGCTCGTGG ACCTGCCGTG GGGACAATAT ACCAAAGACA ATTTCGACCT CGTAAGAGCG
CAGAAAATAC TCGACACCGA CCATTTCGGC CTCGAAAAGG TGAAGGAGCG CATTATCGAA
TACCTCGCGG TGCTCAAACT GAAAGGTAAC CTCAAAGCGC CGATCCTCTG CCTCTACGGC
CCTCCGGGGG TGGGTAAAAC TTCGCTCGGG AAGTCCATTG CAAAGGCGCT TAACCGCGAA
TACATTCGCA TGGCGCTGGG CGGCGTGCAC GACGAAGCCG AAATCCGCGG CCACCGCAAG
ACTTATATTG GCGCGATGCC CGGAAAAATC ATTCAGAACA TCAAAAAAGC AGGTTCTGCC
AACCCGGTGT TCATCCTGGA TGAAATTGAT AAGGTAAGCT CCGACTACCG CGGCGATCCT
TCGTCAGCTT TGCTGGAAGT ACTCGACCCC GAGCAAAACT CTTCGTTTAC AGATAATTAC
CTCGAAGTAG AATACGACCT TTCGAAAGTA CTTTTCGTAG CTACCGCCAA CTCGCTCGAC
ACCATCCACC CCGCATTGCG CGACCGGATG GAGATCATCG AGATGACCGG CTACACGATC
GAAGAAAAAT TGCAGATCGC GAAACGTTAC CTCGTTCCGA AGCAACGCAA AGACCATGGC
CTGAAAGCAA CCGACGTGAA GGTAGACGAC GCCGCATTGC TGAAAGTGAT CGAAGGCTAC
ACCCGCGAAT CGGGCGTGCG CAACCTTGAA CAGAAAGTGG GGACGGTGGT GCGCAAGATC
GCGAAATCGG TAGCAATGGA GCAGGATTAT CCCAAAACCA TCAAAGCCGA ACAAGTCGAA
AAATACCTTG GCGCAGAGAT TTTTGATAAG GATTTGTACC AGGACAACGA CTTCGCAGGC
GTTGTTACCG GCCTCGCATG GACCTCGGTA GGCGGTGAAA TATTGTTCAT CGAAACCAGC
CTGAGCCGCG GCAAAGGTGG ACTGACGTTA TCCGGCCAGC TAGGCGACGT GATGAAAGAA
TCGGCCGTGG CTGCATTGTC GTACCTCAAA GCCAACGCGG AACGGCTCGG CATCGACTAC
CGGATTTTCA ACCATTACGA CCTGCACGTG CACGTGCCTG CGGGCGCGGT GCCCAAAGAT
GGCCCGAGCG CGGGCGTAAC GATGGTCACT TCCATGGCCT CGATATTTAC ACAGCGCCGG
GTGAAACCTT TCATTGCCAT GACGGGTGAG ATTACCCTGC GCGGAAAAGT GCTTCCGGTA
GGCGGCGTGA AGGAAAAAAT TCTCGCAGCG CGGCGCGCGG GTGTGAAGGA GATCATTCTT
TGTGTTAAAA ACCGCAAGGA CGTGGAAGAA GTACCGGCCA ACTACGTCAA AGACCTGAGC
TTCCATTACG TGGATCAGAT CGACGAGGTG CTGGGTATCG CATTGCTTCC CGAGAAAGTG
AACAACCCGA TGAACTTCGT TTTCCCCGAT GAGAAGAAGG AAAAAGAGGA AAGCGGGTTT
GTCACAATGA CCGCATAG
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| Protein sequence | MSDSDMDSLE IVPLGGPDGS DEPFELPNEL AILPIRQTVL FPGMVIPVTV VRQKAIRLVK
KIYRNSDINQ RILGAVTQAI PNKEDPTAED LYNIGTVAQI LKMITLPDGN VTIIVQGRQR
FEIKSIVNEE PYLTAEVRAI EDSFVGPTKK EAKALLQSLR DGAHKIMRLN PEIPQEARIA
LDNIESPIFL IHFLSSNINV EVADKQKLLE ERNGHKQATL LLQYMMREIE MLELKREIQT
KASSDIDQQQ RDYFLRQQIK VLHDELGMDS PERDLDEIRL KASQKKWTDA VKAHFDKELS
KLQRINPMAP EYPVTMNYLE TLVDLPWGQY TKDNFDLVRA QKILDTDHFG LEKVKERIIE
YLAVLKLKGN LKAPILCLYG PPGVGKTSLG KSIAKALNRE YIRMALGGVH DEAEIRGHRK
TYIGAMPGKI IQNIKKAGSA NPVFILDEID KVSSDYRGDP SSALLEVLDP EQNSSFTDNY
LEVEYDLSKV LFVATANSLD TIHPALRDRM EIIEMTGYTI EEKLQIAKRY LVPKQRKDHG
LKATDVKVDD AALLKVIEGY TRESGVRNLE QKVGTVVRKI AKSVAMEQDY PKTIKAEQVE
KYLGAEIFDK DLYQDNDFAG VVTGLAWTSV GGEILFIETS LSRGKGGLTL SGQLGDVMKE
SAVAALSYLK ANAERLGIDY RIFNHYDLHV HVPAGAVPKD GPSAGVTMVT SMASIFTQRR
VKPFIAMTGE ITLRGKVLPV GGVKEKILAA RRAGVKEIIL CVKNRKDVEE VPANYVKDLS
FHYVDQIDEV LGIALLPEKV NNPMNFVFPD EKKEKEESGF VTMTA
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