Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4128 |
Symbol | |
ID | 8227726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4984061 |
End bp | 4985551 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644931971 |
Product | altronate oxidoreductase |
Protein accession | YP_003088496 |
Protein GI | 255037875 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.450764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTAC CGCAGCTTTC CCCCCAATTG CTCGACCAGC AGCCCGAGCT CCTACCCGAT CACCGGAGAC TTCTTGCATT GCCCGAAAAA ATCATCCAGT TCGGCACAGG CGTACTTTTG CGCGGCTTGC CCGACTACTT TGTGAACAAA GCCAACGCAC AGGGCATTTT CAACGGGCGG ATCGTGGTCG TCAAATCCAC CAGTACGGGG GGAACGGATG CGTTTTCCGA GCAGAGCAAC ATTTTTTCGC ACAGCATCCG CGGCATCGAA GACGGAAATC AGGTCGACGA CGCGGTGATC AACACCAGCA TCAGCCGCAC ATTGGCAGCA GCCAGCGATT GGACCGCTAT TCTGGAATGC GCACGCAATC AGGAGATTAA CATTGTGATT TCAAATACGA CGGAAGTTGG AATACAACTT ACCGACGACG ATATTTCCGC CAATCCGCCG GTGTCGTTTC CCGGTAAACT GACGGCCTAC TTGCTCGAAC GTTATCGGGC ATTCAATGGC TCAGCCGAAT CGGGGATGGT GATTGTGCCT ACCGAGCTGA TCGTGGGCAA CGGCCCGAAG CTGAAAGCGA TCGTACTCGA ACAGGCCCGC CGCCACAATC CGGACGAAGG TTTTATCAGT TGGCTGGAAA ACGACAACCA TTTTTGCAGC TCGCTTGTGG ACCGCATTGT GCCCGGCAAA CCGGATGCCG AAACCATTGA AGCACTTTCT CAAAAACAAG GTTTCCGCGA CGATTTGCTG ATCGTTTCCG AAGTGTACCG CCTTTGGGCC ATCGAAGGCG GCCAGCACGT GCGCGACGTC CTCAGCTTCG CACAGGCCGA CAAGGGTGTG GTGATCGAAC CTAACATTGA TCTTTTCCGG GAATTGAAAC TAAGGCTCCT GAATGGAACG CACACATTGG CTTCCGGCCT TGCCTACCTG CACGGACTGG ACACGGTGCG TGAAGCGATG GAAAATGCAG AAACTGCACA ATTTATCGAA CGGGTAATGC TGAATGAGCT GGCGCCAGCC ATTCCTTATA AAGTCGATCC GGCACAAGCA CAGGAATTTG GTCGCCAGGT GCTCGACCGC TTCCGCAACC CGTTCATCCG CCATCAGCTG ATTGACATTA CGGTGCAATA CACGGCCAAA ATGAAAATGC GCAACATTCC GACGCTTTTG AACCATTATC AGCAATCGGA AGAAGTGCCG GCTTTATTCG CCAAAGGCTT TGCTGCATTC CTGCGGTTTA TGAAGCCTGT TGTGCATAAA GACGGCGGAT ATTACGGCGA GCGCGACGGC CAGCCGTATT CAATCCGGTG CGATTCCGCG GCCTATTTTG ATGAGAAGTG GAAAAATGCA GCCTCTCCGG TCGACCTGGC GCAACAGGTG CTGAGCGACG TATCGCTTTG GGATACCGAC CTAACCCTTC TGCCGGGTTT TGCCGAAGCT GTAAAAGGCC ACATGACGGA GCCCGTCGTT ACAGGGACTT CCACGATTTA A
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Protein sequence | MSLPQLSPQL LDQQPELLPD HRRLLALPEK IIQFGTGVLL RGLPDYFVNK ANAQGIFNGR IVVVKSTSTG GTDAFSEQSN IFSHSIRGIE DGNQVDDAVI NTSISRTLAA ASDWTAILEC ARNQEINIVI SNTTEVGIQL TDDDISANPP VSFPGKLTAY LLERYRAFNG SAESGMVIVP TELIVGNGPK LKAIVLEQAR RHNPDEGFIS WLENDNHFCS SLVDRIVPGK PDAETIEALS QKQGFRDDLL IVSEVYRLWA IEGGQHVRDV LSFAQADKGV VIEPNIDLFR ELKLRLLNGT HTLASGLAYL HGLDTVREAM ENAETAQFIE RVMLNELAPA IPYKVDPAQA QEFGRQVLDR FRNPFIRHQL IDITVQYTAK MKMRNIPTLL NHYQQSEEVP ALFAKGFAAF LRFMKPVVHK DGGYYGERDG QPYSIRCDSA AYFDEKWKNA ASPVDLAQQV LSDVSLWDTD LTLLPGFAEA VKGHMTEPVV TGTSTI
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