Gene Dfer_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4116 
Symbol 
ID8227714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4968852 
End bp4969448 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content55% 
IMG OID644931959 
Producthypothetical protein 
Protein accessionYP_003088484 
Protein GI255037863 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCCA TAGTTGTATA CTGCGGTTCA AATCCGGGTA AGAAAGCGCT GTATGCCGAA 
GCTGCCTATG CAATAGGCAA GGCACTGGCG GAGCGCAACA TCAAGCTGAT CTACGGCGGC
GGTAATCTGG GCCTGATGGG CCGCGTGGCC GACGGCGCCA TGGACCAGGG AGGGTTTGTC
ACCGGCATTA TCCCCAATTT TCTGGCCAAG CTGGAAGTGG CGCACAAGAC GCTGTCCGAG
CTACATTTCG TTGAAACCAT GCATGAGCGG AAGGCCAAAA TGGTGTCGAT GTCCGACGGC
GTGATCGCAT TACCCGGCGG CTACGGCACA TTGGACGAGC TTTTCGAGAT CCTGACCTGG
GCACAGCTCC GCATTTTCCA CGGCCCGGTG GGACTTTTGA ACGTCAACGG GTTTTACGAT
CTTTTGCTTT TGCAACTCGA TAAGATGGTT GAAGAAGGCT TCCTGCGGCC CGATACGCGT
CAGCTGCTGG TCGTTTCGGA TGAACCTGCC GCACTCCTCG CAAAAATGGA GGCCTACCGT
TTGCAAAACG CGGAAAATAA GCCGCTGGAC GGGTCGTTGT ATGTAGATAA AAACTAG
 
Protein sequence
MHSIVVYCGS NPGKKALYAE AAYAIGKALA ERNIKLIYGG GNLGLMGRVA DGAMDQGGFV 
TGIIPNFLAK LEVAHKTLSE LHFVETMHER KAKMVSMSDG VIALPGGYGT LDELFEILTW
AQLRIFHGPV GLLNVNGFYD LLLLQLDKMV EEGFLRPDTR QLLVVSDEPA ALLAKMEAYR
LQNAENKPLD GSLYVDKN