Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4115 |
Symbol | |
ID | 8227713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4967258 |
End bp | 4968835 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644931958 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003088483 |
Protein GI | 255037862 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCTT TCTGCCTTTT AGCCTTGACT GTCGTTTCCT CCTACTGTGC CCACGCACAA TTGGAAAACC TCGGAAAATC GATCAATACC GAATACAACG AGATCAGCCC GATCATTTCG CCCGACGGTA AAACGATCTA CTTCTCGCGC GTAAGCCATC CGCAGAACAC GCACGGCCCG AAAGGCAGCC AGGATATCTG GTTTTCTGAG CTGAAAAGCG ATAAATGGAC GCCCGCACGC AGGCTGCCCG CACCACTTAA CAAGGAGGAT TACAATAGCC TTTACAGCAT CACACCCGAC GGCAACACCT TGCTGATCAA GGGTTCCTAC AAAAACGGCA CCTACGAGAC ACGCGGCTTT TCCACCAGTA AAAAAACGGC AAGGGGCTGG TCGGCGCCGA ATAAGCTGGA CATTCCAGGT TATACCAAAC TCAGCAAGGG CCAGTTCGAC TGCGGCTATC TGTCGAATGA CGGAAAAGTG CTGGTCATGT CATTCAGCGA GAAGAAAAAC AGCAAAGTGG ATGACCTCTA CGTCAGTTTC AAGCAAAAAG ACGGTTCCTG GTCCAAACCG ATGAATCTCG GCGCGGAGAT CAATACGGAA GATTTTACCG AAACGACCCC TTTTCTTGCC CCGGACGGCG TAACGCTGTA CTTTTCCAGC GACCGCAAAG GCGGCCAGGG AAGCAATGAC ATTTATTACA GTAAGCGCAT TGACAAGTCA TGGAAAAGAT GGAGCCGACC CGTAAACCTC GGCCCGGCCA TCAATACCGA TGGTTATGAC GCCTATTACA CGATTTCTGC CCTCGGCGAC TTCGCGTACA TGGTCTCTTT TAAAGACACC GAGGGCAAAG GCGACATTGT CCGGTACAAT CTTCAACCCA AACCTGCGCC TGCCGATTCG GCGGTTGAAG CGCCCGTGGC CGTTGTTCCG CCATCCGACC CCGTCGTGAT GATCAGCGGC AAGGTCATCG ATTCCAAAAC CAATAAGCCG GTAGAGGCGA CGATTATTTA CGAAGACCTG ACAACCGGTG AAGAAGTGGG AACGGCGACC ACCAACCCAA CCACCGGAGA GTACAAACTC GTGCTTCCTT ATGGCCAGAA GTACAGTATG CGCGCCGTAG CGCCCAATTT CATAGCCGAG GGCGAGAACA TCGACCTTAC CGACTCGACC GGGAAAGAGA AGAGCTTCAA GGAAATAGCC AATAAGTCGC TCAAACTGAT CCCGATCGAA GAAGGCCAGA TCGTACGGCT CAACAACATC TTCTTTGCCA CCGGGAAGGC CACGCTTCGG GAAGAATCAT TCCCCGAACT GAACCGTATT GCCATTTCAA TGACCGAAAA CAAGACATTG GCCATTGAGC TCGGCGGGCA CACGGATAAC ACCGGTAGCG CGGAGTTTAA CGTCAACCTA TCGCAGGAGC GTGCAGACAC CGTTCGCGAG TACCTCATCG GGAAAGGCAT TGAGCCGGAT CGCATCGCCA GCAAGGGTTA TGGCGAAACC AAGCCTGTCG CCACGAACGA CACGCCCGAA GGACAGCAAC AAAACCGTCG CGTGGAATTC AAGATATTGA AGAAATAG
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Protein sequence | MRAFCLLALT VVSSYCAHAQ LENLGKSINT EYNEISPIIS PDGKTIYFSR VSHPQNTHGP KGSQDIWFSE LKSDKWTPAR RLPAPLNKED YNSLYSITPD GNTLLIKGSY KNGTYETRGF STSKKTARGW SAPNKLDIPG YTKLSKGQFD CGYLSNDGKV LVMSFSEKKN SKVDDLYVSF KQKDGSWSKP MNLGAEINTE DFTETTPFLA PDGVTLYFSS DRKGGQGSND IYYSKRIDKS WKRWSRPVNL GPAINTDGYD AYYTISALGD FAYMVSFKDT EGKGDIVRYN LQPKPAPADS AVEAPVAVVP PSDPVVMISG KVIDSKTNKP VEATIIYEDL TTGEEVGTAT TNPTTGEYKL VLPYGQKYSM RAVAPNFIAE GENIDLTDST GKEKSFKEIA NKSLKLIPIE EGQIVRLNNI FFATGKATLR EESFPELNRI AISMTENKTL AIELGGHTDN TGSAEFNVNL SQERADTVRE YLIGKGIEPD RIASKGYGET KPVATNDTPE GQQQNRRVEF KILKK
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