| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4111 |
|---|
| Symbol | |
|---|
| ID | 8227709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4963233 |
|---|
| End bp | 4964042 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644931954 |
|---|
| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_003088479 |
|---|
| Protein GI | 255037858 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGTAT TCCCTAATGC CAAGATCAAT ATCGGTTTAA ATATTGTCGA AAAACGTCCG
GACGGTTTCC ATAATATCGA ATCCTGTTTT TACCCGGTAG GCTGGTCGGA TGCACTGGAA
ATCACCCAGG CGGAACAGTT TTCATTTCAC GCGGATGGAA TAGCGATCCC CGGTAATGCG
AGCGACAACC TTTGCATCAA GGCATATGAA ATGCTGAGGA GTGATTACCA TCTGCCTCCC
GTTAAAATAC ATTTGTTGAA AACAGTGCCC ATCGGTGCCG GATTGGGCGG CGGGTCTGCC
GATGCCGCAT TTGCGATCAA GGCTTTGAAC CAGTTGTTCA ATCTGAACAT TTCAGTCGGG
GAGCAGGAGG AATATGCACG GCGCATCGGA AGCGATTGTG CTTTTTTTAT CCGGAACAAA
CCCATGTATT GCTTCGGAAA AGGAGATGAG TTTGATGCAA TCGACATTAA TATCTCCGGG
AAGTGGATTG CGCTGGTAAA CCCGGGCATC CATATTTCTA CCGTAGAAGC ATATTCGGGC
GTGGTCGCGA AACGAAGCAC CGGCGATTTG CGTACTATAT TGAGCGGGCC GATAACCGGA
TGGAAAGATC ACGTGCGCAA CGATTTCGAA GCAACGTTAT TTCAAAAATA TCCTCTTTTG
GCTGACACAA AGGATAAATT ATACGACCTC GGAGCGGAAT ATGCAGCAAT GAGCGGTTCA
GGTTCTACGT TGTTCGGGAT TTTCAAGGAG GAACAGAATG TGAAACAGCA TTTCCCTGAT
TTTCGCCTTT GGCAAGGGTT CCTTAGGTAA
|
|---|
| Protein sequence | MLVFPNAKIN IGLNIVEKRP DGFHNIESCF YPVGWSDALE ITQAEQFSFH ADGIAIPGNA
SDNLCIKAYE MLRSDYHLPP VKIHLLKTVP IGAGLGGGSA DAAFAIKALN QLFNLNISVG
EQEEYARRIG SDCAFFIRNK PMYCFGKGDE FDAIDINISG KWIALVNPGI HISTVEAYSG
VVAKRSTGDL RTILSGPITG WKDHVRNDFE ATLFQKYPLL ADTKDKLYDL GAEYAAMSGS
GSTLFGIFKE EQNVKQHFPD FRLWQGFLR
|
|---|
| |