Gene Dfer_4103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4103 
Symbol 
ID8227701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4955658 
End bp4956215 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content47% 
IMG OID644931946 
Productprotein of unknown function DUF255 
Protein accessionYP_003088471 
Protein GI255037850 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1331] Highly conserved protein containing a thioredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.57841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAT TGCTGTCTTC GCTGATCCTA TTTTCGGCAA TGCTTGTTGC TCTCACCGGC 
TTCAAAGCGG ACACGAATAA GCCCGCTGAC GGAATCCAGT GGCTCACAAT TGATGAAGCC
TATGCAAAAA TTCAGAAAGA ACCCCGCAAA GTGCTGGTCG ACGTTTACAC GGACTGGTGC
GGCTGGTGCA AGGTGATGGA CCGCGAGACG TTCAAGGATA AGGCCGTTAC CGACTATATC
AATAAAAAAT ATTATGCTGT GAAGCTCGAT GCAGAGCAAA AAGGGACGAT CAAATTAGGC
GACAAGGAGT TCAAATACCT CGCCCAGGGT GGCCGCGGCA TCAACGAAAT TGCGTTGGCA
TTAACCAACA ACCAGCCCAG CTATCCTACC ACCGTTTTCC TGGACGACCA CTTCAACATG
ATCCAACCCC TAGCAGGATA CCTGAAAGCA AAGGAATTTC ACCAGATCAT CACCTTTTTC
GGCGAAGATT TCCACAAAAA GCAAGATTTC GAGACTTTTA AGGCAAAGAC TTACAAGGAA
TTGTATCCGG CAAAGTGA
 
Protein sequence
MKRLLSSLIL FSAMLVALTG FKADTNKPAD GIQWLTIDEA YAKIQKEPRK VLVDVYTDWC 
GWCKVMDRET FKDKAVTDYI NKKYYAVKLD AEQKGTIKLG DKEFKYLAQG GRGINEIALA
LTNNQPSYPT TVFLDDHFNM IQPLAGYLKA KEFHQIITFF GEDFHKKQDF ETFKAKTYKE
LYPAK